WHO SMART Guideline: Surveillance and Outbreak Toolkit
0.2.1 - CI Build International flag

WHO SMART Guideline: Surveillance and Outbreak Toolkit, published by WHO. This is not an authorized publication; it is the continuous build for version 0.2.1. This version is based on the current content of https://github.com/WorldHealthOrganization/smart-ot and changes regularly. See the Directory of published versions

Artifact Index

This page provides a list of the FHIR artifacts defined as part of this implementation guide.

Structures: Logical Models

These define data models that represent the domain covered by this implementation guide in more business-friendly terms than the underlying FHIR resources.

Surveillance & Outbreak Toolkit - AFRO MRCIF
Surveillance & Outbreak Toolkit Measles
Surveillance & Outbreak Toolkit Measles- Classification
Surveillance & Outbreak Toolkit Measles- Classification
Surveillance & Outbreak Toolkit Measles- Clinical
Surveillance & Outbreak Toolkit Measles- Clinical
Surveillance & Outbreak Toolkit Measles- Contact Tracing
Surveillance & Outbreak Toolkit Measles- Contact Tracing
Surveillance & Outbreak Toolkit Measles- Demographics
Surveillance & Outbreak Toolkit Measles- Demographics
Surveillance & Outbreak Toolkit Measles- Epidemiological Data
Surveillance & Outbreak Toolkit Measles- Laboratory Resultss
Surveillance & Outbreak Toolkit Measles- Laboratory Resultss
Surveillance & Outbreak Toolkit Measles- Reporting Source
Surveillance & Outbreak Toolkit Measles- Reporting Source
Surveillance & Outbreak Toolkit Measles- TravelDetails
Surveillance & Outbreak Toolkit Measles- Vaccination Statuss
Surveillance & Outbreak Toolkit Measles- Vaccination Statuss
Surveillance & Outbreak Toolkit T1
Surveillance & Outbreak Toolkit T1 Case Information
Surveillance & Outbreak Toolkit T1 Conclusion
Surveillance & Outbreak Toolkit T1 Exposure
Surveillance & Outbreak Toolkit T1 Exposure - Animal
Surveillance & Outbreak Toolkit T1 Exposure - Chemical
Surveillance & Outbreak Toolkit T1 Exposure - Food Details
Surveillance & Outbreak Toolkit T1 Exposure - Insect
Surveillance & Outbreak Toolkit T1 Exposure - Nosocomial
Surveillance & Outbreak Toolkit T1 Exposure - Personal Assumption
Surveillance & Outbreak Toolkit T1 Exposure - Travel History
Surveillance & Outbreak Toolkit T1 Exposure - Water Details
Surveillance & Outbreak Toolkit T1 Exposure - Water and Food
Surveillance & Outbreak Toolkit T1 - Laboratory
Surveillance & Outbreak Toolkit T1 - Notification Interview
Surveillance & Outbreak Toolkit T1 Clinical
Surveillance & Outbreak Toolkit T1 Clinical - Cardiology
Surveillance & Outbreak Toolkit T1 Clinical - Comorbidity
Surveillance & Outbreak Toolkit T1 Clinical - Cutaneous
Surveillance & Outbreak Toolkit T1 Clinical - ENT
Surveillance & Outbreak Toolkit T1 Clinical - Gastro-intestinal
Surveillance & Outbreak Toolkit T1 Clinical - Neurology
Surveillance & Outbreak Toolkit T1 Clinical - Respiratory
Surveillance & Outbreak Toolkit T1 Clinical - Treatment Info
Surveillance & Outbreak Toolkit T1 Clinical - Treatments
Surveillance & Outbreak Toolkit T1 Clinical - Urogynecology
Surveillance & Outbreak Toolkit T1 Clinical - Vaccination
Surveillance & Outbreak Toolkit T1 Exposure - Contacts
Surveillance & Outbreak Toolkit T1 Exposure - Mass Gathering

Structures: Questionnaires

These define forms used by systems conforming to this implementation guide to capture or expose data to end users.

AFRO MEASLES/ RUBELLA SUSPECTED CASE REPORTING FORM

AFRO MEASLES/ RUBELLA SUSPECTED CASE REPORTING FORM

Generic Respiratory Disease Case Investigation Form

Generic Respiratory Disease Case Investigation Form

Measles Case Investigation Questionnaire

Measles Case Investigation Questionnaire

T0 Case Investigation Questionnaire

T0 Case Investigation Questionnaire

Structures: Resource Profiles

These define constraints on FHIR resources for systems conforming to this implementation guide.

Measles Case Investigation Form Composition

Measles Case Investigation Form Composition

Measles Encounter

Abstraction for a Measles Encounter. There should be a Measles Encounter associated to each public health authortiy (PHA)

Measles Organization

Abstraction for a Measles Organization. There should be a Measles Organization associated to each public health authortiy (PHA)

Measles Patient

Measles Patient

Structures: Extension Definitions

These define constraints on FHIR data types for systems conforming to this implementation guide.

Guardian

Name of mother/Guardian

Landmark

A landmark to locate the house

Occupation

Occupation

ProviderType

Type Of Provider Reporting

WorkAddress

Work or school address

Terminology: Value Sets

These define sets of codes used by systems conforming to this implementation guide.

Antigen

Antigen

ConfirmationBasis

ConfirmationBasis

DiscardingBasis

DiscardingBasis

Exposure Location

Exposure Location

FinalClassification

FinalClassification

InfectionSetting

InfectionSetting

LocalCasesPresent

LocalCasesPresent

Result

Result

Sample Type

Sample Type

SourceOfInfection

SourceOfInfection

Specimen Number

Specimen Number

Test Performed

Test Performed

AFRO MRCIF Test Type

AFRO MRCIF Test Type

Animal Contact Location

Animal Contact Location

Animal Contact Type

Animal Contact Type

Animal Exposure Location

Animal Exposure Location

Case Status

Case Status

Contact Type

Contact Type

Domesticated or Wild

Domesticated or Wild

Localization of Skin Disorder

Localization of Skin Disorder

Pathogen Tested

Pathogen Tested

Patient Clinical Course Outcome

Patient Clinical Course Outcome

Place Of Care

Place Of Care

Rash Type

Rash Type

Reported By

Reported By

Results

Results

Route Of Administration

Route Of Administration

SOT Biological Sex

Biological Sex

SOT Measles Detected By
SOT Measles Initial Diagnosis

SOT Measles Initial Diagnosis

SOT Measles Locality Type

SOT Measles Locality Type

SOT Measles No Of Doses

SOT Measles No Of Doses

SOT Measles Provider Type

SOT Measles Provider Type

SOT Measles Source Of Information Type

SOT Measles Source Of Information Type

SOT Measles Vaccine Type

SOT Measles Vaccine Type

SOT Yes No

Yes No

Specimen Collected

Specimen Collected

Vaccine Info Source

Vaccine Info Source

Water Characteristics

Water Characteristics

Yes No Unknown

Yes No Unknown

Terminology: Code Systems

These define new code systems used by systems conforming to this implementation guide.

AFRO MRCIF CodeSystem for Data Elements

CodeSystem for PAHO MRCIF Data Elements

Animal Contact Location

Animal Contact Location

Animal Contact Type

Animal Contact Type

Antigen Code System

Antigen Code System

Case Status

Case Status

Confirmation Basis

Confirmation Basis

Contact Type

Contact Type

Detected By Code System

Detected By Code System

Discarding Basis

Discarding Basis

Domesticated or Wild

Domesticated or Wild

Exposure Location

Exposure Location

Exposure Location

Exposure Location

Final Classification

Final Classification

InfectionSetting

InfectionSetting

Initial Diagnosis Code System

Initial Diagnosis Code System

LocalCasesPresent

LocalCasesPresent

Locality Type Code System

Locality Type Code System

Localization of Skin Disorder

Localization of Skin Disorder

Number of Doses

Number of Doses

PAHO MRCIF CodeSystem for Data Elements

CodeSystem for PAHO MRCIF Data Elements

Pathogen Tested

Pathogen Tested

Patient Clinical Course Outcome

Patient Clinical Course Outcome

Place Of Care

Place Of Care

Rash Type

Rash Type

Reported By

Reported By

Result Code System

Result Code System

Results

Results

Route Of Administration

Route Of Administration

Sample Type Code System

Sample Type Code System

Source Of Infection

Source Of Infection

Source Of Information

Source Of Information

Specimen Collected

Specimen Collected

Specimen Number Code System

Specimen Number Code System

Test Performed Code System

Test Performed Code System

Test Type

Test Type

Type of Provider Code System

Type of Provider Code System

Vaccine Info Source

Vaccine Info Source

Vaccine Type

Vaccine Type

Water Characteristics

Water Characteristics

Yes No Unknown

Yes No Unknown

Terminology: Structure Maps

These define transformations to convert between data structures used by systems conforming to this implementation guide.

StructureMap/AFROMRCIFLogicalModelToResources
StructureMap/AFROMRCIFQuestionnaireToLogicalModel
StructureMap/AFROMRCIFQuestionnaireToResources
StructureMap/MeaslesLogicalModelToResources
StructureMap/MeaslesQuestionnaireToLogicalModel
StructureMap/MeaslesQuestionnaireToResources
StructureMap/MetaDataTypesHelper

Example: Example Instances

These are example instances that show what data produced and consumed by systems conforming with this implementation guide might look like.

Response1

Other

These are resources that are used within this implementation guide that do not fit into one of the other categories.

example-document-bundle-case-report-1