WHO SMART Guideline: Surveillance and Outbreak Toolkit
0.2.1 - CI Build International flag

WHO SMART Guideline: Surveillance and Outbreak Toolkit, published by WHO. This is not an authorized publication; it is the continuous build for version 0.2.1. This version is based on the current content of https://github.com/WorldHealthOrganization/smart-ot and changes regularly. See the Directory of published versions

Logical Model: Surveillance & Outbreak Toolkit Measles- Laboratory Resultss ( Abstract )

Official URL: http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTMeaslesLaboratoryResults Version: 0.2.1
Draft as of 2023-11-07 Computable Name: SOTMeaslesLaboratoryResults

Usage:

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

This structure is derived from BackboneElement

NameFlagsCard.TypeDescription & Constraintsdoco
.. SOTMeaslesLaboratoryResults 0..*BackboneElementThis is an abstract type.
Elements defined in Ancestors: @id, extension, modifierExtension
Surveillance & Outbreak Toolkit Measles- Laboratory Resultss
Instances of this logical model are not marked to be the target of a Reference
... SpecimenCollectionDate 1..1dateTimeDate of specimen(s) collection
... SpecimenSentDate 0..1dateDate specimen(s) sent to laboratory
... SpecimenRecdDate 0..1dateTimeDate specimen(s) received in laboratory
... LabResultsDate 0..1dateTimeDate of results from laboratory
... LabResults 0..1codeLaboratory results (serology, viral detection,genotype)
... Results 1..1CodingResult
Binding: Result (required)
... SampleId 0..1stringSample ID
... SampleType 1..1codeType of specimen
Binding: Sample Type (required)
... TypeOfTest 0..1codeType of test
Binding: Test Performed (required)
... Antigen 0..1CodingAntigen
Binding: Antigen (required)
... SpecimenNumber 0..1codeSpecimen number
Binding: Specimen Number (required)
... ViralGenotype 0..1stringViral Genotype, if detected

doco Documentation for this format

Terminology Bindings (Differential)

PathConformanceValueSet
SOTMeaslesLaboratoryResults.ResultsrequiredResult (a valid code from Result Code System)
SOTMeaslesLaboratoryResults.SampleTyperequiredSampleType (a valid code from Sample Type Code System)
SOTMeaslesLaboratoryResults.TypeOfTestrequiredTestPerformed (a valid code from Test Performed Code System)
SOTMeaslesLaboratoryResults.AntigenrequiredAntigen (a valid code from Antigen Code System)
SOTMeaslesLaboratoryResults.SpecimenNumberrequiredSpecimenNumber (a valid code from Specimen Number Code System)
NameFlagsCard.TypeDescription & Constraintsdoco
.. SOTMeaslesLaboratoryResults 0..*BackboneElementThis is an abstract type.
Elements defined in Ancestors: @id, extension, modifierExtension
Surveillance & Outbreak Toolkit Measles- Laboratory Resultss
Instances of this logical model are not marked to be the target of a Reference
... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
... SpecimenCollectionDate 1..1dateTimeDate of specimen(s) collection
... SpecimenSentDate 0..1dateDate specimen(s) sent to laboratory
... LabName 0..1stringLaboratory Name
... LabResultsDate 0..1dateTimeDate of results from laboratory
... LabResults 0..1codeLaboratory results (serology, viral detection,genotype)
... Results 1..1CodingResult
Binding: Result (required)
... SampleId 0..1stringSample ID
... SampleType 1..1codeType of specimen
Binding: Sample Type (required)
... TypeOfTest 0..1codeType of test
Binding: Test Performed (required)
... Antigen 0..1CodingAntigen
Binding: Antigen (required)
... SpecimenNumber 0..1codeSpecimen number
Binding: Specimen Number (required)
... ViralGenotype 0..1stringViral Genotype, if detected

doco Documentation for this format

Terminology Bindings

PathConformanceValueSet
SOTMeaslesLaboratoryResults.ResultsrequiredResult (a valid code from Result Code System)
SOTMeaslesLaboratoryResults.SampleTyperequiredSampleType (a valid code from Sample Type Code System)
SOTMeaslesLaboratoryResults.TypeOfTestrequiredTestPerformed (a valid code from Test Performed Code System)
SOTMeaslesLaboratoryResults.AntigenrequiredAntigen (a valid code from Antigen Code System)
SOTMeaslesLaboratoryResults.SpecimenNumberrequiredSpecimenNumber (a valid code from Specimen Number Code System)

Constraints

IdGradePath(s)DetailsRequirements
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()
NameFlagsCard.TypeDescription & Constraintsdoco
.. SOTMeaslesLaboratoryResults 0..*BackboneElementThis is an abstract type.
Elements defined in Ancestors: @id, extension, modifierExtension
Surveillance & Outbreak Toolkit Measles- Laboratory Resultss
Instances of this logical model are not marked to be the target of a Reference
... @id 0..1stringUnique id for inter-element referencing
... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
... SpecimenSentDate 0..1dateDate specimen(s) sent to laboratory
... SpecimenRecdDate 0..1dateTimeDate specimen(s) received in laboratory
... LabName 0..1stringLaboratory Name
... LabResultsDate 0..1dateTimeDate of results from laboratory
... LabResults 0..1codeLaboratory results (serology, viral detection,genotype)
... Results 1..1CodingResult
Binding: Result (required)
... SampleId 0..1stringSample ID
... SampleType 1..1codeType of specimen
Binding: Sample Type (required)
... TypeOfTest 0..1codeType of test
Binding: Test Performed (required)
... Antigen 0..1CodingAntigen
Binding: Antigen (required)
... SpecimenNumber 0..1codeSpecimen number
Binding: Specimen Number (required)
... ViralGenotype 0..1stringViral Genotype, if detected

doco Documentation for this format

Terminology Bindings

PathConformanceValueSet
SOTMeaslesLaboratoryResults.ResultsrequiredResult (a valid code from Result Code System)
SOTMeaslesLaboratoryResults.SampleTyperequiredSampleType (a valid code from Sample Type Code System)
SOTMeaslesLaboratoryResults.TypeOfTestrequiredTestPerformed (a valid code from Test Performed Code System)
SOTMeaslesLaboratoryResults.AntigenrequiredAntigen (a valid code from Antigen Code System)
SOTMeaslesLaboratoryResults.SpecimenNumberrequiredSpecimenNumber (a valid code from Specimen Number Code System)

Constraints

IdGradePath(s)DetailsRequirements
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()

This structure is derived from BackboneElement

Summary

Mandatory: 0 element (3 nested mandatory elements)

Differential View

This structure is derived from BackboneElement

NameFlagsCard.TypeDescription & Constraintsdoco
.. SOTMeaslesLaboratoryResults 0..*BackboneElementThis is an abstract type.
Elements defined in Ancestors: @id, extension, modifierExtension
Surveillance & Outbreak Toolkit Measles- Laboratory Resultss
Instances of this logical model are not marked to be the target of a Reference
... SpecimenCollectionDate 1..1dateTimeDate of specimen(s) collection
... SpecimenSentDate 0..1dateDate specimen(s) sent to laboratory
... SpecimenRecdDate 0..1dateTimeDate specimen(s) received in laboratory
... LabResultsDate 0..1dateTimeDate of results from laboratory
... LabResults 0..1codeLaboratory results (serology, viral detection,genotype)
... Results 1..1CodingResult
Binding: Result (required)
... SampleId 0..1stringSample ID
... SampleType 1..1codeType of specimen
Binding: Sample Type (required)
... TypeOfTest 0..1codeType of test
Binding: Test Performed (required)
... Antigen 0..1CodingAntigen
Binding: Antigen (required)
... SpecimenNumber 0..1codeSpecimen number
Binding: Specimen Number (required)
... ViralGenotype 0..1stringViral Genotype, if detected

doco Documentation for this format

Terminology Bindings (Differential)

PathConformanceValueSet
SOTMeaslesLaboratoryResults.ResultsrequiredResult (a valid code from Result Code System)
SOTMeaslesLaboratoryResults.SampleTyperequiredSampleType (a valid code from Sample Type Code System)
SOTMeaslesLaboratoryResults.TypeOfTestrequiredTestPerformed (a valid code from Test Performed Code System)
SOTMeaslesLaboratoryResults.AntigenrequiredAntigen (a valid code from Antigen Code System)
SOTMeaslesLaboratoryResults.SpecimenNumberrequiredSpecimenNumber (a valid code from Specimen Number Code System)

Key Elements View

NameFlagsCard.TypeDescription & Constraintsdoco
.. SOTMeaslesLaboratoryResults 0..*BackboneElementThis is an abstract type.
Elements defined in Ancestors: @id, extension, modifierExtension
Surveillance & Outbreak Toolkit Measles- Laboratory Resultss
Instances of this logical model are not marked to be the target of a Reference
... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
... SpecimenCollectionDate 1..1dateTimeDate of specimen(s) collection
... SpecimenSentDate 0..1dateDate specimen(s) sent to laboratory
... LabName 0..1stringLaboratory Name
... LabResultsDate 0..1dateTimeDate of results from laboratory
... LabResults 0..1codeLaboratory results (serology, viral detection,genotype)
... Results 1..1CodingResult
Binding: Result (required)
... SampleId 0..1stringSample ID
... SampleType 1..1codeType of specimen
Binding: Sample Type (required)
... TypeOfTest 0..1codeType of test
Binding: Test Performed (required)
... Antigen 0..1CodingAntigen
Binding: Antigen (required)
... SpecimenNumber 0..1codeSpecimen number
Binding: Specimen Number (required)
... ViralGenotype 0..1stringViral Genotype, if detected

doco Documentation for this format

Terminology Bindings

PathConformanceValueSet
SOTMeaslesLaboratoryResults.ResultsrequiredResult (a valid code from Result Code System)
SOTMeaslesLaboratoryResults.SampleTyperequiredSampleType (a valid code from Sample Type Code System)
SOTMeaslesLaboratoryResults.TypeOfTestrequiredTestPerformed (a valid code from Test Performed Code System)
SOTMeaslesLaboratoryResults.AntigenrequiredAntigen (a valid code from Antigen Code System)
SOTMeaslesLaboratoryResults.SpecimenNumberrequiredSpecimenNumber (a valid code from Specimen Number Code System)

Constraints

IdGradePath(s)DetailsRequirements
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()

Snapshot View

NameFlagsCard.TypeDescription & Constraintsdoco
.. SOTMeaslesLaboratoryResults 0..*BackboneElementThis is an abstract type.
Elements defined in Ancestors: @id, extension, modifierExtension
Surveillance & Outbreak Toolkit Measles- Laboratory Resultss
Instances of this logical model are not marked to be the target of a Reference
... @id 0..1stringUnique id for inter-element referencing
... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
... SpecimenSentDate 0..1dateDate specimen(s) sent to laboratory
... SpecimenRecdDate 0..1dateTimeDate specimen(s) received in laboratory
... LabName 0..1stringLaboratory Name
... LabResultsDate 0..1dateTimeDate of results from laboratory
... LabResults 0..1codeLaboratory results (serology, viral detection,genotype)
... Results 1..1CodingResult
Binding: Result (required)
... SampleId 0..1stringSample ID
... SampleType 1..1codeType of specimen
Binding: Sample Type (required)
... TypeOfTest 0..1codeType of test
Binding: Test Performed (required)
... Antigen 0..1CodingAntigen
Binding: Antigen (required)
... SpecimenNumber 0..1codeSpecimen number
Binding: Specimen Number (required)
... ViralGenotype 0..1stringViral Genotype, if detected

doco Documentation for this format

Terminology Bindings

PathConformanceValueSet
SOTMeaslesLaboratoryResults.ResultsrequiredResult (a valid code from Result Code System)
SOTMeaslesLaboratoryResults.SampleTyperequiredSampleType (a valid code from Sample Type Code System)
SOTMeaslesLaboratoryResults.TypeOfTestrequiredTestPerformed (a valid code from Test Performed Code System)
SOTMeaslesLaboratoryResults.AntigenrequiredAntigen (a valid code from Antigen Code System)
SOTMeaslesLaboratoryResults.SpecimenNumberrequiredSpecimenNumber (a valid code from Specimen Number Code System)

Constraints

IdGradePath(s)DetailsRequirements
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()

This structure is derived from BackboneElement

Summary

Mandatory: 0 element (3 nested mandatory elements)

 

Other representations of profile: CSV, Excel