This is the continuous build for version 1.0.0. This version is based on the current content of https://github.com/WorldHealthOrganization/ddcc and changes regularly.
Draft as of 2024-01-19 |
{
"resourceType" : "StructureMap",
"id" : "SHCToCoreDataSetVS",
"meta" : {
"versionId" : "11",
"lastUpdated" : "2023-02-15T20:22:07.304+00:00"
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><pre>map "http://smart.who.int/ddcc/StructureMap/SHCToCoreDataSetVS" = "SHCToCoreDataSetVS"\r\n\r\n\r\nuses "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-vaccination-bundle-dm" alias SHCVaccinationBundleDM as source\r\nuses "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-patient-general-dm" alias SHCPatientDM as source\r\nuses "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-vaccination-dm" alias SHCImmunizationDM as source\r\nuses "http://hl7.org/fhir/StructureDefinition/Bundle" alias DDCCBundle as target\r\nuses "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS" alias DDCCVS as produced\r\n\r\ngroup SHCToVS(source shc : SHCVaccinationBundleDM, target ddccBundle : DDCCBundle) {\r\n shc.entry as patientEntrySHC then {\r\n patientEntrySHC.resource : Patient first as patient then {\r\n shc.entry as entry then {\r\n // entry.resource : Immunization as immunization where vaccineCode.memberOf('http://smart.who.int/ddcc/ValueSet/who-ddcc-allowed-vaccines-covid-19') -> ddccBundle.entry as outentry, create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS') as ddcc then {\r\n entry.resource : Immunization as immunization -> ddccBundle.entry as outentry, create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS') as ddcc then {\r\n immunization then PatientToDDCCVS(patient, ddcc) "set patient";\r\n immunization -> ddcc.vaccination as vaccination then ImmunizationToDDCC(immunization, vaccination) "set vaccination";\r\n immunization -> outentry.resource = ddcc "set outentry";\r\n } "immunizations";\r\n } "entries";\r\n } "get patient";\r\n } "find patient";\r\n}\r\n\r\ngroup PatientToDDCCVS(source patient : SHCPatientDM, target tgt : DDCCVS) {\r\n patient.name as name then NameToText(name, tgt) "set name";\r\n patient.birthDate as birthDate -> tgt.birthDate = birthDate "set birthDate";\r\n patient.identifier first as identifier -> tgt.identifier = identifier "set identifier";\r\n}\r\n\r\ngroup NameToText(source name : HumanName, target ddcc) {\r\n // append doesn't work until ddcc.name is set\r\n name.given first as given -> ddcc.name = (given.replaceMatches('$', ' ')) "set first name";\r\n // name.given not_first as other -> ddcc.name as tName, ddcc.name = append( tName, other ) "set other names";\r\n name.given not_first as other -> ddcc.name as tName, (other.replaceMatches('$', ' ')) as spaced, ddcc.name = append(tName, spaced) "set other names";\r\n name.family as family -> ddcc.name as tName, ddcc.name = append(tName, family) "add family name";\r\n name.text as text -> ddcc.name = text "set full name";\r\n}\r\n\r\ngroup ImmunizationToDDCC(source immunization : SHCImmunizationDM, target vaccination) {\r\n immunization.vaccineCode as vaccine then {\r\n vaccine.coding as coding then {\r\n coding -> vaccination.vaccine = coding "set default vaccine";\r\n coding -> vaccination.brand = coding "set default brand";\r\n coding where coding.memberOf('http://smart.who.int/ddcc/ValueSet/vaccine-covid19-cvx') -> vaccination.vaccine = translate(coding, 'http://smart.who.int/ddcc/ConceptMap/vaccine-covid19-cvx-to-icd11', 'Coding') "translate COVID CVX vaccine";\r\n coding where coding.memberOf('http://smart.who.int/ddcc/ValueSet/vaccine-covid19-snomed') -> vaccination.vaccine = translate(coding, 'http://smart.who.int/ddcc/ConceptMap/vaccine-covid19-snomed-to-icd11', 'Coding') "translate COVID SNOMED vaccine";\r\n };\r\n };\r\n immunization.manufacturer as tman then {\r\n tman.identifier as identifier -> vaccination.manufacturer as manufacturer then {\r\n identifier.system as system -> manufacturer.system = system "set manufacturer system";\r\n identifier.value as value -> manufacturer.code = value "set manufacturer value";\r\n } "set manufacturer id";\r\n };\r\n immunization.lotNumber as lot -> vaccination.lot = lot "set lot";\r\n immunization.occurrence as date -> vaccination.date = date "set date";\r\n immunization.performer as performer then {\r\n performer.actor as actor then {\r\n actor.display as centre -> vaccination.centre = centre "set centre";\r\n };\r\n };\r\n}\r\n\r\n</pre></div>"
},
"url" : "http://smart.who.int/ddcc/StructureMap/SHCToCoreDataSetVS",
"version" : "1.0.0",
"name" : "SHCToCoreDataSetVS",
"status" : "draft",
"date" : "2024-01-19T16:18:21+00:00",
"publisher" : "WHO",
"contact" : [
{
"name" : "WHO",
"telecom" : [
{
"system" : "url",
"value" : "http://who.int"
}
]
}
],
"jurisdiction" : [
{
"coding" : [
{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}
]
}
],
"structure" : [
{
"url" : "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-vaccination-bundle-dm",
"mode" : "source",
"alias" : "SHCVaccinationBundleDM"
},
{
"url" : "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-patient-general-dm",
"mode" : "source",
"alias" : "SHCPatientDM"
},
{
"url" : "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-vaccination-dm",
"mode" : "source",
"alias" : "SHCImmunizationDM"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/Bundle",
"mode" : "target",
"alias" : "DDCCBundle"
},
{
"url" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS",
"mode" : "produced",
"alias" : "DDCCVS"
}
],
"group" : [
{
"name" : "SHCToVS",
"typeMode" : "none",
"input" : [
{
"name" : "shc",
"type" : "SHCVaccinationBundleDM",
"mode" : "source"
},
{
"name" : "ddccBundle",
"type" : "DDCCBundle",
"mode" : "target"
}
],
"rule" : [
{
"name" : "find patient",
"source" : [
{
"context" : "shc",
"element" : "entry",
"variable" : "patientEntrySHC"
}
],
"rule" : [
{
"name" : "get patient",
"source" : [
{
"context" : "patientEntrySHC",
"type" : "Patient",
"element" : "resource",
"listMode" : "first",
"variable" : "patient"
}
],
"rule" : [
{
"name" : "entries",
"source" : [
{
"context" : "shc",
"element" : "entry",
"variable" : "entry"
}
],
"rule" : [
{
"name" : "immunizations",
"source" : [
{
"context" : "entry",
"type" : "Immunization",
"element" : "resource",
"variable" : "immunization"
}
],
"target" : [
{
"context" : "ddccBundle",
"contextType" : "variable",
"element" : "entry",
"variable" : "outentry"
},
{
"contextType" : "variable",
"variable" : "ddcc",
"transform" : "create",
"parameter" : [
{
"valueString" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS"
}
]
}
],
"rule" : [
{
"name" : "set patient",
"source" : [
{
"context" : "immunization"
}
],
"dependent" : [
{
"name" : "PatientToDDCCVS",
"variable" : [
"patient",
"ddcc"
]
}
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},
{
"name" : "set vaccination",
"source" : [
{
"context" : "immunization"
}
],
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"context" : "ddcc",
"contextType" : "variable",
"element" : "vaccination",
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}
],
"dependent" : [
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"name" : "ImmunizationToDDCC",
"variable" : [
"immunization",
"vaccination"
]
}
]
},
{
"name" : "set outentry",
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],
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"contextType" : "variable",
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}
]
}
]
}
],
"documentation" : "entry.resource : Immunization as immunization where vaccineCode.memberOf('http://smart.who.int/ddcc/ValueSet/who-ddcc-allowed-vaccines-covid-19') -> ddccBundle.entry as outentry, create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS') as ddcc then {"
}
]
}
]
}
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}
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"name" : "PatientToDDCCVS",
"typeMode" : "none",
"input" : [
{
"name" : "patient",
"type" : "SHCPatientDM",
"mode" : "source"
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}
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"dependent" : [
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"name" : "NameToText",
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}
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},
{
"name" : "set birthDate",
"source" : [
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"variable" : "birthDate"
}
],
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"name" : "NameToText",
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"rule" : [
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"source" : [
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"element" : "given",
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"variable" : "given"
}
],
"target" : [
{
"context" : "ddcc",
"contextType" : "variable",
"element" : "name",
"transform" : "evaluate",
"parameter" : [
{
"valueString" : "given.replaceMatches('$', ' ')"
}
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}
],
"documentation" : "append doesn't work until ddcc.name is set"
},
{
"name" : "set other names",
"source" : [
{
"context" : "name",
"element" : "given",
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"variable" : "other"
}
],
"target" : [
{
"context" : "ddcc",
"contextType" : "variable",
"element" : "name",
"variable" : "tName"
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{
"contextType" : "variable",
"variable" : "spaced",
"transform" : "evaluate",
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"valueString" : "other.replaceMatches('$', ' ')"
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"context" : "ddcc",
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{
"valueId" : "tName"
},
{
"valueId" : "spaced"
}
]
}
],
"documentation" : "name.given not_first as other -> ddcc.name as tName, ddcc.name = append( tName, other ) \"set other names\";"
},
{
"name" : "add family name",
"source" : [
{
"context" : "name",
"element" : "family",
"variable" : "family"
}
],
"target" : [
{
"context" : "ddcc",
"contextType" : "variable",
"element" : "name",
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"context" : "ddcc",
"contextType" : "variable",
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{
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{
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],
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{
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"element" : "name",
"transform" : "copy",
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{
"valueId" : "text"
}
]
}
]
}
]
},
{
"name" : "ImmunizationToDDCC",
"typeMode" : "none",
"input" : [
{
"name" : "immunization",
"type" : "SHCImmunizationDM",
"mode" : "source"
},
{
"name" : "vaccination",
"mode" : "target"
}
],
"rule" : [
{
"name" : "vaccineCode",
"source" : [
{
"context" : "immunization",
"element" : "vaccineCode",
"variable" : "vaccine"
}
],
"rule" : [
{
"name" : "coding",
"source" : [
{
"context" : "vaccine",
"element" : "coding",
"variable" : "coding"
}
],
"rule" : [
{
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"source" : [
{
"context" : "coding"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "vaccine",
"transform" : "copy",
"parameter" : [
{
"valueId" : "coding"
}
]
}
]
},
{
"name" : "set default brand",
"source" : [
{
"context" : "coding"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "brand",
"transform" : "copy",
"parameter" : [
{
"valueId" : "coding"
}
]
}
]
},
{
"name" : "translate COVID CVX vaccine",
"source" : [
{
"context" : "coding",
"condition" : "coding.memberOf('http://smart.who.int/ddcc/ValueSet/vaccine-covid19-cvx')"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "vaccine",
"transform" : "translate",
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"valueId" : "coding"
},
{
"valueString" : "http://smart.who.int/ddcc/ConceptMap/vaccine-covid19-cvx-to-icd11"
},
{
"valueString" : "Coding"
}
]
}
]
},
{
"name" : "translate COVID SNOMED vaccine",
"source" : [
{
"context" : "coding",
"condition" : "coding.memberOf('http://smart.who.int/ddcc/ValueSet/vaccine-covid19-snomed')"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "vaccine",
"transform" : "translate",
"parameter" : [
{
"valueId" : "coding"
},
{
"valueString" : "http://smart.who.int/ddcc/ConceptMap/vaccine-covid19-snomed-to-icd11"
},
{
"valueString" : "Coding"
}
]
}
]
}
]
}
]
},
{
"name" : "manufacturer",
"source" : [
{
"context" : "immunization",
"element" : "manufacturer",
"variable" : "tman"
}
],
"rule" : [
{
"name" : "set manufacturer id",
"source" : [
{
"context" : "tman",
"element" : "identifier",
"variable" : "identifier"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "manufacturer",
"variable" : "manufacturer"
}
],
"rule" : [
{
"name" : "set manufacturer system",
"source" : [
{
"context" : "identifier",
"element" : "system",
"variable" : "system"
}
],
"target" : [
{
"context" : "manufacturer",
"contextType" : "variable",
"element" : "system",
"transform" : "copy",
"parameter" : [
{
"valueId" : "system"
}
]
}
]
},
{
"name" : "set manufacturer value",
"source" : [
{
"context" : "identifier",
"element" : "value",
"variable" : "value"
}
],
"target" : [
{
"context" : "manufacturer",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "value"
}
]
}
]
}
]
}
]
},
{
"name" : "set lot",
"source" : [
{
"context" : "immunization",
"element" : "lotNumber",
"variable" : "lot"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "lot",
"transform" : "copy",
"parameter" : [
{
"valueId" : "lot"
}
]
}
]
},
{
"name" : "set date",
"source" : [
{
"context" : "immunization",
"element" : "occurrence",
"variable" : "date"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "date",
"transform" : "copy",
"parameter" : [
{
"valueId" : "date"
}
]
}
]
},
{
"name" : "performer",
"source" : [
{
"context" : "immunization",
"element" : "performer",
"variable" : "performer"
}
],
"rule" : [
{
"name" : "actor",
"source" : [
{
"context" : "performer",
"element" : "actor",
"variable" : "actor"
}
],
"rule" : [
{
"name" : "set centre",
"source" : [
{
"context" : "actor",
"element" : "display",
"variable" : "centre"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "centre",
"transform" : "copy",
"parameter" : [
{
"valueId" : "centre"
}
]
}
]
}
]
}
]
}
]
}
]
}
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