WHO Digital Documentation of COVID-19 Certificates (DDCC)
1.0.0 - CI Build
This is the continuous build for version 1.0.0. This version is based on the current content of https://github.com/WorldHealthOrganization/ddcc and changes regularly.
| Draft as of 2024-04-24 |
{
"resourceType" : "StructureMap",
"id" : "SHCToCoreDataSetTR",
"meta" : {
"versionId" : "9",
"lastUpdated" : "2023-02-15T19:50:41.165+00:00"
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><pre>map "http://smart.who.int/ddcc/StructureMap/SHCToCoreDataSetTR" = "SHCToCoreDataSetTR"\r\n\r\n\r\nuses "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-infectious-disease-laboratory-bundle-dm" alias SHCLabBundleDM as source\r\nuses "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-patient-general-dm" alias SHCPatientDM as source\r\nuses "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-infectious-disease-laboratory-result-observation-dm" alias SHCLabDM as source\r\nuses "http://hl7.org/fhir/StructureDefinition/Bundle" alias DDCCBundle as target\r\nuses "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR" alias DDCCTR as produced\r\n\r\ngroup SHCToTR(source shc : SHCLabBundleDM, target ddccBundle : DDCCBundle) {\r\n shc.entry as patientEntrySHC then {\r\n patientEntrySHC.resource : Patient first as patient then {\r\n shc.entry as entry then {\r\n // entry.resource : Immunization as immunization where vaccineCode.memberOf('http://smart.who.int/ddcc/ValueSet/who-ddcc-allowed-vaccines-covid-19') -> ddccBundle.entry as outentry, create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS') as ddcc then {\r\n entry.resource : Observation as lab -> ddccBundle.entry as outentry, create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR') as ddcc then {\r\n lab then PatientToDDCCTR(patient, ddcc) "set patient";\r\n lab -> ddcc.test as test then LabToDDCC(lab, test) "set test";\r\n lab -> outentry.resource = ddcc "set outentry";\r\n } "labs";\r\n } "entries";\r\n } "get patient";\r\n } "find patient";\r\n}\r\n\r\ngroup PatientToDDCCTR(source patient : SHCPatientDM, target tgt : DDCCTR) {\r\n patient.name as name then NameToText(name, tgt) "set name";\r\n patient.birthDate as birthDate -> tgt.birthDate = birthDate "set birthDate";\r\n patient.identifier first as identifier -> tgt.identifier = identifier "set identifier";\r\n}\r\n\r\ngroup NameToText(source name : HumanName, target ddcc) {\r\n // append doesn't work until ddcc.name is set\r\n name.given first as given -> ddcc.name = (given.replaceMatches('$', ' ')) "set first name";\r\n // name.given not_first as other -> ddcc.name as tName, ddcc.name = append( tName, other ) "set other names";\r\n name.given not_first as other -> ddcc.name as tName, (other.replaceMatches('$', ' ')) as spaced, ddcc.name = append(tName, spaced) "set other names";\r\n name.family as family -> ddcc.name as tName, ddcc.name = append(tName, family) "add family name";\r\n name.text as text -> ddcc.name = text "set full name";\r\n}\r\n\r\ngroup LabToDDCC(source lab : SHCLabDM, target test) {\r\n lab.code as code then {\r\n code.coding first as labType then {\r\n labType -> test.type = labType "set default type";\r\n labType where labType.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-covid19-loinc') -> test.type = translate(labType, 'http://smart.who.int/ddcc/ConceptMap/lab-test-type-covid19-loinc-to-icd11', 'Coding') "translate loinc type";\r\n labType where labType.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-covid19-loinc') -> test.pathogen = c('http://id.who.int/icd11/mms', 'XN109') "set pathogen to COVID";\r\n };\r\n };\r\n lab.effectiveDateTime as date -> test.date = date "set date";\r\n lab.valueCodeableConcept as value then {\r\n value.coding first as result then {\r\n result -> test.result = result "set default result";\r\n result where result.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-snomed') -> test.result = translate(result, 'http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-snomed-to-icd11') "translate snomed result";\r\n };\r\n };\r\n}\r\n\r\n</pre></div>"
},
"url" : "http://smart.who.int/ddcc/StructureMap/SHCToCoreDataSetTR",
"version" : "1.0.0",
"name" : "SHCToCoreDataSetTR",
"status" : "draft",
"date" : "2024-04-24T00:11:34+00:00",
"publisher" : "WHO",
"contact" : [
{
"name" : "WHO",
"telecom" : [
{
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"value" : "http://who.int"
}
]
}
],
"jurisdiction" : [
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"coding" : [
{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}
]
}
],
"structure" : [
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"url" : "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-infectious-disease-laboratory-bundle-dm",
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"url" : "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-infectious-disease-laboratory-result-observation-dm",
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},
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"url" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR",
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"documentation" : "name.given not_first as other -> ddcc.name as tName, ddcc.name = append( tName, other ) \"set other names\";"
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"mode" : "source"
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}
]
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}
],
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{
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"element" : "result",
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}
]
},
{
"name" : "translate snomed result",
"source" : [
{
"context" : "result",
"condition" : "result.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-snomed')"
}
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"contextType" : "variable",
"element" : "result",
"transform" : "translate",
"parameter" : [
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"valueId" : "result"
},
{
"valueString" : "http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-snomed-to-icd11"
}
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}
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}
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]
}
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