WHO SMART Guideline: Surveillance and Outbreak Toolkit
0.2.1 - CI Build
WHO SMART Guideline: Surveillance and Outbreak Toolkit
0.2.1 - CI Build
WHO SMART Guideline: Surveillance and Outbreak Toolkit, published by WHO. This is not an authorized publication; it is the continuous build for version 0.2.1. This version is based on the current content of https://github.com/WorldHealthOrganization/smart-ot and changes regularly. See the Directory of published versions
| Draft as of 2023-11-07 |
@prefix fhir: <http://hl7.org/fhir/> . @prefix owl: <http://www.w3.org/2002/07/owl#> . @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . # - resource ------------------------------------------------------------------- a fhir:StructureMap ; fhir:nodeRole fhir:treeRoot ; fhir:id [ fhir:v "AFROMRCIFLogicalModelToResources"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><pre class=\"fml\">\r\n<b>map</b><span style=\"color: navy\"> "</span>http://worldhealthorganization.github.io/smart-ot/StructureMap/AFROMRCIFLogicalModelToResources<span style=\"color: navy\">" = "</span>AFROMRCIFLogicalModelToResources<span style=\"color: navy\">"\r\n\r\n</span><b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-AFROMRCIF.html\" title=\"Surveillance & Outbreak Toolkit - AFRO MRCIF\">http://worldhealthorganization.github.io/smart-ot/StructureDefinition/AFROMRCIF</a><span style=\"color: navy\">" </span><b>alias </b>MeaslesLogicalModel <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R4/bundle.html\" title=\"Bundle\">http://hl7.org/fhir/StructureDefinition/Bundle</a><span style=\"color: navy\">" </span><b>alias </b>MeaslesCIFBundle <b>as </b><b>target</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-MeaslesCIFComposition.html\" title=\"Measles Case Investigation Form Composition\">http://worldhealthorganization.github.io/smart-ot/StructureDefinition/MeaslesCIFComposition</a><span style=\"color: navy\">" </span><b>alias </b>MeaslesCIFComposition <b>as </b><b>target</b>\r\n\r\n<b>imports</b><span style=\"color: navy\"> "</span><a href=\"StructureMap-MetaDataTypesHelper.html\" title=\"MetaDataTypesHelper\">http://worldhealthorganization.github.io/smart-ot/StructureMap/MetaDataTypesHelper</a><span style=\"color: navy\">"\r\n</span>\r\n<b>group </b>MRCIFLogicalModelToResources<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>AFROMRCIF, <b>target</b> <span style=\"color: maroon\">bundle</span><span style=\"color: navy\"> : </span>Bundle<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span>bundle.type = <span style=\"color: blue\">'document'</span> <i>"set bundle type"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: #b36b00\" title=\"This element was not defined prior to R5\">// lm.ReportingSource as reportingSource then { reportingSource.DateReportedNational as date -> bundle.timestamp = date "set date"; } "set timestamp";</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">bid</span><span style=\"color: navy\">, </span> bundle.id = <span style=\"color: maroon\">bid</span> <i>"set id"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">cid</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">prid</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">oid</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">eid</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Composition'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">composition</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">cid</span><span style=\"color: navy\">)</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">lm</span><b> then </b>LmToComposition<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">composition</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">cid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">prid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">oid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">eid</span><span style=\"color: navy\">)</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Patient'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">patient</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm.Demographics<b> as </b><span style=\"color: maroon\">demographics</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">demographics</span><b> then </b>DemographicsToPatient<span style=\"color: navy\">(</span><span style=\"color: maroon\">demographics</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">patient</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"create patient"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span>entry.resource = <span style=\"color: maroon\">patient</span> <i>"set patient as entry"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"map patient resource"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">prid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Practitioner'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">practitioner</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm.Classification<b> as </b><span style=\"color: maroon\">classification</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">classification</span><b> then </b>classificationToPractitioner<span style=\"color: navy\">(</span><span style=\"color: maroon\">classification</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">practitioner</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">prid</span><span style=\"color: navy\">)</span> <i>"create practitioner"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span>entry.resource = <span style=\"color: maroon\">practitioner</span> <i>"set practitioner as entry"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"map practitioner resource"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">oid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Organization'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">organization</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm.ReportingSource<b> as </b><span style=\"color: maroon\">reportingSource</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">reportingSource</span><b> then </b>ReportingSourceToOrganization<span style=\"color: navy\">(</span><span style=\"color: maroon\">reportingSource</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">organization</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">oid</span><span style=\"color: navy\">)</span> <i>"create organization"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span>entry.resource = <span style=\"color: maroon\">organization</span> <i>"set organization as entry"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"map organization resource"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">eid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Encounter'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">encounter</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm.lmCaseInvestigation<b> as </b><span style=\"color: maroon\">var</span><b> then</b><span style=\"color: navy\"> {\r\n</span> var.DateOfConsultation<b> as </b><span style=\"color: maroon\">date</span><b> then</b><span style=\"color: navy\"> {\r\n</span> date<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">type</span><span style=\"color: navy\">, </span> type.code = <span style=\"color: blue\">'AMB'</span><span style=\"color: navy\">, </span> type.system = <span style=\"color: blue\">'http://terminology.hl7.org/CodeSystem/v3-ActCode'</span><span style=\"color: navy\">, </span> type.display = <span style=\"color: blue\">'ambulatory'</span><b> then </b>createCompositionEncounterResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">date</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">type</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">eid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">encounter</span><span style=\"color: navy\">)</span> <i>"create encounter"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set encounter"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set encounter"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span>entry.resource = <span style=\"color: maroon\">encounter</span> <i>"set encounter as entry"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"map encounter resource"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">lm</span><b> then </b>mapClinicalToObservations<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">composition</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set clinical data"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">lm</span><b> then </b>mapLabsToDiagnosticReport<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">composition</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set labs data"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">lm</span><b> then </b>mapVaccinationStatusToImmunization<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">composition</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set immunization data"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">lm</span><b> then </b>mapClassificationToConditions<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">composition</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">eid</span><span style=\"color: navy\">)</span> <i>"set classification"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"map composition resource"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set entries"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>mapClassificationToConditions<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>MeaslesLogicalModel, <b>target</b> <span style=\"color: maroon\">bundle</span><span style=\"color: navy\"> : </span>Bundle, <b>target</b> <span style=\"color: maroon\">composition</span><span style=\"color: navy\"> : </span>MeaslesCIFComposition, <b>source</b> <span style=\"color: maroon\">pid</span>, <b>source</b> <span style=\"color: maroon\">eid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span> composition.section<b> as </b><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span> section.title = <span style=\"color: blue\">'Classification'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm.Classification<b> as </b><span style=\"color: maroon\">classification</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Condition/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Condition'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">condition</span><b> then</b><span style=\"color: navy\"> {\r\n</span> classification<span style=\"color: navy\"><b> -> </b></span>condition.id = <span style=\"color: maroon\">id</span> <i>"set id"</i><span style=\"color: navy\">;</span>\r\n classification<span style=\"color: navy\"><b> -> </b></span> condition.verificationStatus<b> as </b><span style=\"color: maroon\">tgtStatus</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">status</span><span style=\"color: navy\">, </span> status.code = <span style=\"color: blue\">'confirmed'</span><span style=\"color: navy\">, </span> status.system = <span style=\"color: blue\">'http://terminology.hl7.org/CodeSystem/condition-ver-status'</span><span style=\"color: navy\">, </span> status.display = <span style=\"color: blue\">'Confirmed'</span><b> then </b>mapCodingtoCodeableConcept<span style=\"color: navy\">(</span><span style=\"color: maroon\">status</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">tgtStatus</span><span style=\"color: navy\">)</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n classification<span style=\"color: navy\"><b> -> </b></span> condition.subject<b> as </b><span style=\"color: maroon\">subject</span><span style=\"color: navy\">, </span> subject.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Patient/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set subject"</i><span style=\"color: navy\">;</span>\r\n classification.FinalClassification<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\"><b> -> </b></span>condition.code<b> as </b><span style=\"color: maroon\">code</span><b> then </b>mapCodingtoCodeableConcept<span style=\"color: navy\">(</span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">code</span><span style=\"color: navy\">)</span> <i>"set code"</i><span style=\"color: navy\">;</span>\r\n classification<span style=\"color: navy\"><b> -> </b></span> condition.encounter<b> as </b><span style=\"color: maroon\">encounter</span><span style=\"color: navy\">, </span> encounter.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Encounter/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">eid</span><span style=\"color: navy\">)</span> <i>"set subject"</i><span style=\"color: navy\">;</span>\r\n classification<span style=\"color: navy\"><b> -> </b></span> condition.category<b> as </b><span style=\"color: maroon\">tgt</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">status</span><span style=\"color: navy\">, </span> status.code = <span style=\"color: blue\">'encounter-diagnosis'</span><span style=\"color: navy\">, </span> status.system = <span style=\"color: blue\">'http://terminology.hl7.org/CodeSystem/condition-category'</span><span style=\"color: navy\">, </span> status.display = <span style=\"color: blue\">'Encounter Diagnosis'</span><b> then </b>mapCodingtoCodeableConcept<span style=\"color: navy\">(</span><span style=\"color: maroon\">status</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">tgt</span><span style=\"color: navy\">)</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n classification.ClassificationDate<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -> </b></span>condition.recordedDate = <span style=\"color: maroon\">date</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n classification.ClassifiedBy<b> as </b><span style=\"color: maroon\">person</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">rpid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">rpid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'RelatedPerson/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">rpid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'RelatedPerson'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">recorder</span><b> then</b><span style=\"color: navy\"> {\r\n</span> person<span style=\"color: navy\"><b> -> </b></span>recorder.id = <span style=\"color: maroon\">rpid</span> <i>"set id"</i><span style=\"color: navy\">;</span>\r\n person<span style=\"color: navy\"><b> -> </b></span> recorder.name<b> as </b><span style=\"color: maroon\">targetName</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'HumanName'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">name</span><span style=\"color: navy\">, </span> name.text = <span style=\"color: maroon\">person</span><b> then </b>humanNameToHumanName<span style=\"color: navy\">(</span><span style=\"color: maroon\">name</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">targetName</span><span style=\"color: navy\">)</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n person<span style=\"color: navy\"><b> -> </b></span> recorder.patient<b> as </b><span style=\"color: maroon\">patient</span><span style=\"color: navy\">, </span> patient.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Patient/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set patient"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set person"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"Set classification"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set section"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>mapContactTracing<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>MeaslesLogicalModel, <b>target</b> <span style=\"color: maroon\">bundle</span><span style=\"color: navy\"> : </span>Bundle, <b>target</b> <span style=\"color: maroon\">composition</span><span style=\"color: navy\"> : </span>MeaslesCIFComposition, <b>source</b> <span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span> composition.section<b> as </b><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span> section.title = <span style=\"color: blue\">'Contact Tracing'</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>mapClinicalToObservations<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>AFROMRCIF, <b>target</b> <span style=\"color: maroon\">bundle</span><span style=\"color: navy\"> : </span>Bundle, <b>target</b> <span style=\"color: maroon\">composition</span><span style=\"color: navy\"> : </span>Composition, <b>source</b> <span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span> composition.section<b> as </b><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span> section.title = <span style=\"color: blue\">'Clinical Data, Follow up and Treatment'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm.Clinical<b> as </b><span style=\"color: maroon\">clinical</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">clinical</span><b> then</b><span style=\"color: navy\"> {\r\n</span> clinical.Fever<b> as </b><span style=\"color: maroon\">fever</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> fever<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n fever<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'DE31'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://worldhealthorganization.github.io/smart-ot/AFROMRCIF'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Fever'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> fever<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">fever</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">fever</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set fever"</i><span style=\"color: navy\">;</span>\r\n clinical.Rash<b> as </b><span style=\"color: maroon\">rash</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> rash<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n rash<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'DE35'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://worldhealthorganization.github.io/smart-ot/AFROMRCIF'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Rash'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> rash<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">rash</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">rash</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n lm.lmCaseInvestigation<b> as </b><span style=\"color: maroon\">var</span><b> then</b><span style=\"color: navy\"> {\r\n</span> var.RashOnsetDate<b> as </b><span style=\"color: maroon\">onsetDate</span><span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Period'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">period</span><span style=\"color: navy\">, </span> period.start = <span style=\"color: maroon\">onsetDate</span><span style=\"color: navy\">, </span> observation.effective = <span style=\"color: maroon\">period</span> <i>"set start date"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set Rash"</i><span style=\"color: navy\">;</span>\r\n clinical.Cough<b> as </b><span style=\"color: maroon\">cough</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> cough<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n cough<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'DE39'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://worldhealthorganization.github.io/smart-ot/AFROMRCIF'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Cough'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> cough<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">cough</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">cough</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set cough"</i><span style=\"color: navy\">;</span>\r\n clinical.Conjunctivitis<b> as </b><span style=\"color: maroon\">conjunctivitis</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> conjunctivitis<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n conjunctivitis<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'DE43'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://worldhealthorganization.github.io/smart-ot/AFROMRCIF'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Conjunctivitis'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> conjunctivitis<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">conjunctivitis</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">conjunctivitis</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set conjunctivitis"</i><span style=\"color: navy\">;</span>\r\n clinical.Coryza<b> as </b><span style=\"color: maroon\">coryza</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> coryza<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n coryza<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'DE47'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://worldhealthorganization.github.io/smart-ot/AFROMRCIF'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Coryza'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> coryza<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">coryza</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">coryza</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set coryza"</i><span style=\"color: navy\">;</span>\r\n clinical.Lymphadenopathy<b> as </b><span style=\"color: maroon\">lymphadenopathy</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lymphadenopathy<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n lymphadenopathy<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'DE51'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://worldhealthorganization.github.io/smart-ot/AFROMRCIF'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Lymphadenopathy'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lymphadenopathy<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">lymphadenopathy</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">lymphadenopathy</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set lymphadenopathy"</i><span style=\"color: navy\">;</span>\r\n clinical.JointPain<b> as </b><span style=\"color: maroon\">jointPain</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> jointPain<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n jointPain<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'DE55'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://worldhealthorganization.github.io/smart-ot/AFROMRCIF'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Joint Pain'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> jointPain<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">jointPain</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">jointPain</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set jointPain"</i><span style=\"color: navy\">;</span>\r\n clinical.Outcome<b> as </b><span style=\"color: maroon\">outcome</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> outcome<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n outcome<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'DE63'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://worldhealthorganization.github.io/smart-ot/AFROMRCIF'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Outcome'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> outcome<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">outcome</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">outcome</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set outcome"</i><span style=\"color: navy\">;</span>\r\n clinical.travelledOutside<b> as </b><span style=\"color: maroon\">travel</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> travel<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n travel<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'DE67'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://worldhealthorganization.github.io/smart-ot/AFROMRCIF'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Outcome'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> travel<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">travel</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">travel</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set travel"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">clinical.specifyInfectionSetting as infection -> uuid() as obsid, bundle.entry as entry, entry.fullUrl = append('urn:uuid:', obsid), section.entry as sectionEntry, sectionEntry.reference = append('Observation/', obsid), entry.resource = create('Observation') as observation then { infection -> observation.id = obsid "set obsid"; infection -> create('Coding') as coding, coding.code = "DE71", coding.system = "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF", coding.display = "Outcome" then { infection -> infection then createObservationResource(infection, coding, observation, pid) "set obs"; } "set obs"; } "set infection";</span>\r\n clinical.HistoryOfHospitalization<b> as </b><span style=\"color: maroon\">admitted</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> admitted<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n admitted<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'DE59'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://worldhealthorganization.github.io/smart-ot/AFROMRCIF'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Outcome'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> admitted<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">admitted</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">admitted</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set infection"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set clinical"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set section"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>createObservationResource<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span>, <b>source</b> <span style=\"color: maroon\">coding</span><span style=\"color: navy\"> : </span>Coding, <b>target</b> <span style=\"color: maroon\">observation</span><span style=\"color: navy\"> : </span>Observation, <b>source</b> <span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> src<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> observation.code = <span style=\"color: maroon\">code</span> <i>"set code"</i><span style=\"color: navy\">;</span>\r\n src<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">value</span><span style=\"color: navy\">, </span> value.coding = <span style=\"color: maroon\">src</span><span style=\"color: navy\">, </span> observation.value = <span style=\"color: maroon\">value</span> <i>"set value"</i><span style=\"color: navy\">;</span>\r\n src<span style=\"color: navy\"><b> -> </b></span>observation.status = <span style=\"color: blue\">'registered'</span> <i>"set status"</i><span style=\"color: navy\">;</span>\r\n src<span style=\"color: navy\"><b> -> </b></span>observation.subject<b> as </b><span style=\"color: maroon\">subject</span><b> then</b><span style=\"color: navy\"> {\r\n</span> src<span style=\"color: navy\"><b> -> </b></span>subject.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Patient/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set subject"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set subject"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>mapLabsToDiagnosticReport<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>MeaslesLogicalModel, <b>target</b> <span style=\"color: maroon\">bundle</span><span style=\"color: navy\"> : </span>Bundle, <b>target</b> <span style=\"color: maroon\">composition</span><span style=\"color: navy\"> : </span>MeaslesCIFComposition, <b>source</b> <span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span> composition.section<b> as </b><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span> section.title = <span style=\"color: blue\">'Specimens & Laboratory Testing'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm.LaboratoryResults<b> as </b><span style=\"color: maroon\">labs</span><span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'DiagnosticReport/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'DiagnosticReport'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">diagnosticReport</span><b> then</b><span style=\"color: navy\"> {\r\n</span> labs<span style=\"color: navy\"><b> -> </b></span>diagnosticReport.id = <span style=\"color: maroon\">id</span> <i>"set id"</i><span style=\"color: navy\">;</span>\r\n labs<span style=\"color: navy\"><b> -> </b></span>diagnosticReport.status = <span style=\"color: blue\">'registered'</span> <i>"set status"</i><span style=\"color: navy\">;</span>\r\n labs<span style=\"color: navy\"><b> -> </b></span> diagnosticReport.subject<b> as </b><span style=\"color: maroon\">subject</span><span style=\"color: navy\">, </span> subject.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Patient/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set subject"</i><span style=\"color: navy\">;</span>\r\n labs.Antigen<b> as </b><span style=\"color: maroon\">antigen</span><span style=\"color: navy\"><b> -> </b></span>diagnosticReport.code<b> as </b><span style=\"color: maroon\">code</span><b> then </b>mapCodingtoCodeableConcept<span style=\"color: navy\">(</span><span style=\"color: maroon\">antigen</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">code</span><span style=\"color: navy\">)</span> <i>"set code"</i><span style=\"color: navy\">;</span>\r\n labs<span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> diagnosticReport.specimen<b> as </b><span style=\"color: maroon\">refSpecimen</span><span style=\"color: navy\">, </span> refSpecimen.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Specimen/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Specimen'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">specimen</span><b> then</b><span style=\"color: navy\"> {\r\n</span> labs<span style=\"color: navy\"><b> -> </b></span>specimen.id = <span style=\"color: maroon\">id</span> <i>"Set idn"</i><span style=\"color: navy\">;</span>\r\n labs.SpecimenCollectionDate<b> as </b><span style=\"color: maroon\">collectDate</span><span style=\"color: navy\"><b> -> </b></span> specimen.collection<b> as </b><span style=\"color: maroon\">collection</span><span style=\"color: navy\">, </span> collection.collected = <span style=\"color: maroon\">collectDate</span> <i>"set date"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">labs.SpecimenSentDate as sentDate -></span>\r\n labs.SpecimenRecdDate<b> as </b><span style=\"color: maroon\">recdDate</span><span style=\"color: navy\"><b> -> </b></span>specimen.receivedTime = <span style=\"color: maroon\">recdDate</span> <i>"set date"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">labs.SampleId as sampleId -> specimen.identifier as identifier, identifier.value = sampleId "set identifier";</span>\r\n labs.SampleType<b> as </b><span style=\"color: maroon\">sampleType</span><span style=\"color: navy\"><b> -> </b></span>specimen.type = <span style=\"color: maroon\">sampleType</span> <i>"set type"</i><span style=\"color: navy\">;</span>\r\n labs.SpecimenNumber<b> as </b><span style=\"color: maroon\">number</span><b> then</b><span style=\"color: navy\"> {\r\n</span> number.display<b> as </b><span style=\"color: maroon\">text</span><span style=\"color: navy\"><b> -> </b></span> specimen.note<b> as </b><span style=\"color: maroon\">note</span><span style=\"color: navy\">, </span> note.text = <span style=\"color: maroon\">text</span> <i>"set note"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set note"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set specimen"</i><span style=\"color: navy\">;</span>\r\n labs<span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> diagnosticReport.performer<b> as </b><span style=\"color: maroon\">performer</span><span style=\"color: navy\">, </span> performer.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Organization/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Organization'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">perfOrg</span><b> then</b><span style=\"color: navy\"> {\r\n</span> labs.LabName<b> as </b><span style=\"color: maroon\">labName</span><span style=\"color: navy\"><b> -> </b></span>perfOrg.name = <span style=\"color: maroon\">labName</span> <i>"set name"</i><span style=\"color: navy\">;</span>\r\n labs<span style=\"color: navy\"><b> -> </b></span>perfOrg.id = <span style=\"color: maroon\">id</span> <i>"set id"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set performer"</i><span style=\"color: navy\">;</span>\r\n labs<span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> diagnosticReport.result<b> as </b><span style=\"color: maroon\">result</span><span style=\"color: navy\">, </span> result.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obsid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observation</span><b> then</b><span style=\"color: navy\"> {\r\n</span> labs<span style=\"color: navy\"><b> -> </b></span>observation.id = <span style=\"color: maroon\">obsid</span> <i>"set obsid"</i><span style=\"color: navy\">;</span>\r\n labs.TypeOfTest<b> as </b><span style=\"color: maroon\">testType</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">testType</span><b> then</b><span style=\"color: navy\"> {\r\n</span> labs.Results<b> as </b><span style=\"color: maroon\">result</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">result</span><b> then </b>createObservationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">result</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">testType</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">observation</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set obs"</i><span style=\"color: navy\">;</span>\r\n labs.LabResultsDate<b> as </b><span style=\"color: maroon\">resultDate</span><span style=\"color: navy\"><b> -> </b></span>observation.effective = <span style=\"color: maroon\">resultDate</span> <i>"set start date"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set testType"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set results"</i><span style=\"color: navy\">;</span>\r\n labs.TypeOfTest<b> as </b><span style=\"color: maroon\">testType</span><span style=\"color: navy\"><b> -> </b></span>diagnosticReport.code = <span style=\"color: maroon\">testType</span> <i>"set code"</i><span style=\"color: navy\">;</span>\r\n labs.LabResultsDate<b> as </b><span style=\"color: maroon\">resultDate</span><span style=\"color: navy\"><b> -> </b></span>diagnosticReport.effective = <span style=\"color: maroon\">resultDate</span> <i>"set date"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set diagnosticReport"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set section"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>createImmunizationResource<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">vax</span><span style=\"color: navy\"> : </span>AFROMRCIFVaccinationStatus, <b>target</b> <span style=\"color: maroon\">bundle</span><span style=\"color: navy\"> : </span>Bundle, <b>target</b> <span style=\"color: maroon\">section</span><span style=\"color: navy\"> : </span>Element, <b>source</b> <span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> vax<span style=\"color: navy\"><b> -> </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> section.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Immunization/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Immunization'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">immunization</span><b> then</b><span style=\"color: navy\"> {\r\n</span> vax<span style=\"color: navy\"><b> -> </b></span>immunization.id = <span style=\"color: maroon\">id</span> <i>"set id"</i><span style=\"color: navy\">;</span>\r\n vax<span style=\"color: navy\"><b> -> </b></span>immunization.status = <span style=\"color: blue\">'completed'</span> <i>"set status"</i><span style=\"color: navy\">;</span>\r\n vax<span style=\"color: navy\"><b> -> </b></span>immunization.vaccineCode<b> as </b><span style=\"color: maroon\">code</span><b> then</b><span style=\"color: navy\"> {\r\n</span> vax.VaccineType<b> as </b><span style=\"color: maroon\">vaccineType</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">vaccineType</span><b> then </b>mapCodingtoCodeableConcept<span style=\"color: navy\">(</span><span style=\"color: maroon\">vaccineType</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">code</span><span style=\"color: navy\">)</span> <i>"set code"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n vax.Source<b> as </b><span style=\"color: maroon\">source</span><span style=\"color: navy\"><b> -> </b></span>immunization.reportOrigin<b> as </b><span style=\"color: maroon\">origin</span><b> then</b><span style=\"color: navy\"> {\r\n</span> source<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">source</span><b> then </b>mapCodingtoCodeableConcept<span style=\"color: navy\">(</span><span style=\"color: maroon\">source</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">origin</span><span style=\"color: navy\">)</span> <i>"set report origin"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n vax.LastDoseDate<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -> </b></span>immunization.occurrence = <span style=\"color: maroon\">date</span> <i>"set date"</i><span style=\"color: navy\">;</span>\r\n vax.NumberOfDoses<b> as </b><span style=\"color: maroon\">doses</span><b> then</b><span style=\"color: navy\"> {\r\n</span> doses.display<b> as </b><span style=\"color: maroon\">seriesDose</span><span style=\"color: navy\"><b> -> </b></span> immunization.protocolApplied<b> as </b><span style=\"color: maroon\">protocol</span><span style=\"color: navy\">, </span> protocol.series = <span style=\"color: maroon\">seriesDose</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set dosenumber"</i><span style=\"color: navy\">;</span>\r\n vax<span style=\"color: navy\"><b> -> </b></span> immunization.patient<b> as </b><span style=\"color: maroon\">subject</span><span style=\"color: navy\">, </span> subject.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Patient/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set subject"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"ad"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>mapVaccinationStatusToImmunization<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>MeaslesLogicalModel, <b>target</b> <span style=\"color: maroon\">bundle</span><span style=\"color: navy\"> : </span>Bundle, <b>target</b> <span style=\"color: maroon\">composition</span><span style=\"color: navy\"> : </span>MeaslesCIFComposition, <b>source</b> <span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span> composition.section<b> as </b><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span> section.title = <span style=\"color: blue\">'Vaccination History'</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm.VaccinationStatus<b> as </b><span style=\"color: maroon\">vax</span><b> then</b><span style=\"color: navy\"> {\r\n</span> vax.NumberOfDoses<b> as </b><span style=\"color: maroon\">doses</span><b> where </b>code = '99'<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">doses</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do"</i><span style=\"color: navy\">;</span>\r\n vax.NumberOfDoses<b> as </b><span style=\"color: maroon\">doses</span><b> where </b>code = '1'<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">doses</span><b> then</b><span style=\"color: navy\"> {\r\n</span> vax.LastDoseDate<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">date</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do1"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n vax.NumberOfDoses<b> as </b><span style=\"color: maroon\">doses</span><b> where </b>code = '2'<b> then</b><span style=\"color: navy\"> {\r\n</span> doses<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">doses</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do2"</i><span style=\"color: navy\">;</span>\r\n vax.LastDoseDate<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">date</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set doses"</i><span style=\"color: navy\">;</span>\r\n vax.NumberOfDoses<b> as </b><span style=\"color: maroon\">doses</span><b> where </b>code = '3'<b> then</b><span style=\"color: navy\"> {\r\n</span> vax<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">doses</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do"</i><span style=\"color: navy\">;</span>\r\n vax<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">doses</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do"</i><span style=\"color: navy\">;</span>\r\n vax.LastDoseDate<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">date</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set doses"</i><span style=\"color: navy\">;</span>\r\n vax.NumberOfDoses<b> as </b><span style=\"color: maroon\">doses</span><b> where </b>code = '4'<b> then</b><span style=\"color: navy\"> {\r\n</span> vax<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">doses</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do"</i><span style=\"color: navy\">;</span>\r\n vax<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">doses</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do"</i><span style=\"color: navy\">;</span>\r\n vax<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">doses</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do"</i><span style=\"color: navy\">;</span>\r\n vax.LastDoseDate<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">date</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">bundle</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">section</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"do"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set doses"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set status"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set section"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>LmToComposition<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>AFROMRCIF, <b>target</b> <span style=\"color: maroon\">composition</span><span style=\"color: navy\"> : </span>Composition, <b>source</b> <span style=\"color: maroon\">cid</span>, <b>source</b> <span style=\"color: maroon\">pid</span>, <b>source</b> <span style=\"color: maroon\">prid</span>, <b>source</b> <span style=\"color: maroon\">oid</span>, <b>source</b> <span style=\"color: maroon\">eid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> cid<span style=\"color: navy\"><b> -> </b></span>composition.id = <span style=\"color: maroon\">cid</span> <i>"set id"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span>composition.status = <span style=\"color: blue\">'final'</span> <i>"set status"</i><span style=\"color: navy\">;</span>\r\n lm.ReportingSource<b> as </b><span style=\"color: maroon\">src</span><b> then</b><span style=\"color: navy\"> {\r\n</span> src.UniqueId<b> as </b><span style=\"color: maroon\">EPIDno</span><span style=\"color: navy\"><b> -> </b></span> composition.identifier<b> as </b><span style=\"color: maroon\">identifier</span><span style=\"color: navy\">, </span> identifier.value = <span style=\"color: maroon\">EPIDno</span> <i>"set identifier"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span>composition.title = <span style=\"color: blue\">'PAHO Measles Case Investigation Form'</span> <i>"set title"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'55751-2'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://loinc.org'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'Public health Case report'</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> composition.type = <span style=\"color: maroon\">code</span> <i>"set type"</i><span style=\"color: navy\">;</span>\r\n lm.CaseInvestigation<b> as </b><span style=\"color: maroon\">var</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">var</span><b> then</b><span style=\"color: navy\"> {\r\n</span> var.DateReportedLocal<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -> </b></span>composition.date = <span style=\"color: maroon\">date</span> <i>"set date"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set date reported local"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span>composition.subject<b> as </b><span style=\"color: maroon\">subject</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span>subject.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Patient/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set subject"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set subject"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span>composition.author<b> as </b><span style=\"color: maroon\">practitioner</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span>practitioner.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Practitioner/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">prid</span><span style=\"color: navy\">)</span> <i>"set author practitioner"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set author practitioner"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span>composition.author<b> as </b><span style=\"color: maroon\">institution</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span>institution.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Organization/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">oid</span><span style=\"color: navy\">)</span> <i>"set author institution"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set author org"</i><span style=\"color: navy\">;</span>\r\n lm<span style=\"color: navy\"><b> -> </b></span>composition.encounter<b> as </b><span style=\"color: maroon\">encounter</span><b> then</b><span style=\"color: navy\"> {\r\n</span> lm<span style=\"color: navy\"><b> -> </b></span>encounter.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Encounter/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">eid</span><span style=\"color: navy\">)</span> <i>"set encounter"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set encounter"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>DemographicsToPatient<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">demographics</span><span style=\"color: navy\"> : </span>DemographicsLogicalModel, <b>target</b> <span style=\"color: maroon\">patient</span><span style=\"color: navy\"> : </span>MeaslesPatient, <b>source</b> <span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> pid<span style=\"color: navy\"><b> -> </b></span>patient.id = <span style=\"color: maroon\">pid</span> <i>"set patient id"</i><span style=\"color: navy\">;</span>\r\n demographics.Name<b> as </b><span style=\"color: maroon\">sourceName</span><span style=\"color: navy\"><b> -> </b></span>patient.name<b> as </b><span style=\"color: maroon\">targetName</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sourceName<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">sourceName</span><b> then </b>humanNameToHumanName<span style=\"color: navy\">(</span><span style=\"color: maroon\">sourceName</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">targetName</span><span style=\"color: navy\">)</span> <i>"Copy name"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"Set name"</i><span style=\"color: navy\">;</span>\r\n demographics.DateOfBirth<b> as </b><span style=\"color: maroon\">dob</span><span style=\"color: navy\"><b> -> </b></span>patient.birthDate = <span style=\"color: maroon\">dob</span> <i>"set date of birth"</i><span style=\"color: navy\">;</span>\r\n demographics.Sex<b> as </b><span style=\"color: maroon\">sex</span><span style=\"color: navy\"><b> -> </b></span>patient.gender = <span style=\"color: maroon\">sex</span> <i>"set sex"</i><span style=\"color: navy\">;</span>\r\n demographics.PlaceOfResidence<b> as </b><span style=\"color: maroon\">sourceAddress</span><span style=\"color: navy\"><b> -> </b></span>patient.address<b> as </b><span style=\"color: maroon\">targetAddress</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sourceAddress<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">sourceAddress</span><b> then </b>addressToAddress<span style=\"color: navy\">(</span><span style=\"color: maroon\">sourceAddress</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">targetAddress</span><span style=\"color: navy\">)</span> <i>"Copy Address"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set address"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>classificationToPractitioner<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">var</span><span style=\"color: navy\"> : </span>AFROMRCIFClassification, <b>target</b> <span style=\"color: maroon\">practitioner</span><span style=\"color: navy\"> : </span>Practitioner, <b>source</b> <span style=\"color: maroon\">prid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> prid<span style=\"color: navy\"><b> -> </b></span>practitioner.id = <span style=\"color: maroon\">prid</span> <i>"set id"</i><span style=\"color: navy\">;</span>\r\n var.ReportedBy<b> as </b><span style=\"color: maroon\">name</span><span style=\"color: navy\"><b> -> </b></span> practitioner.name<b> as </b><span style=\"color: maroon\">humanName</span><span style=\"color: navy\">, </span> humanName.text = <span style=\"color: maroon\">name</span> <i>"set name"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>ReportingSourceToOrganization<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">reportingSource</span><span style=\"color: navy\"> : </span>ReportingSourceLogicalModel, <b>target</b> <span style=\"color: maroon\">organization</span><span style=\"color: navy\"> : </span>Organization, <b>source</b> <span style=\"color: maroon\">oid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> oid<span style=\"color: navy\"><b> -> </b></span>organization.id = <span style=\"color: maroon\">oid</span> <i>"set id"</i><span style=\"color: navy\">;</span>\r\n reportingSource.HealthServiceName<b> as </b><span style=\"color: maroon\">name</span><span style=\"color: navy\"><b> -> </b></span>organization.name = <span style=\"color: maroon\">name</span> <i>"set name"</i><span style=\"color: navy\">;</span>\r\n reportingSource.HealthServiceTelephone<b> as </b><span style=\"color: maroon\">phoneSource</span><span style=\"color: navy\"><b> -> </b></span> organization.contact<b> as </b><span style=\"color: maroon\">contactDetails</span><span style=\"color: navy\">, </span> contactDetails.telecom<b> as </b><span style=\"color: maroon\">phoneTarget</span><b> then</b><span style=\"color: navy\"> {\r\n</span> phoneSource<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">phoneSource</span><b> then </b>contactPointToContactPoint<span style=\"color: navy\">(</span><span style=\"color: maroon\">phoneSource</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">phoneTarget</span><span style=\"color: navy\">)</span> <i>"set org contact"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set phone"</i><span style=\"color: navy\">;</span>\r\n reportingSource.PlaceOfReporting<b> as </b><span style=\"color: maroon\">locationSource</span><span style=\"color: navy\"><b> -> </b></span> organization.contact<b> as </b><span style=\"color: maroon\">contactDetails</span><span style=\"color: navy\">, </span> contactDetails.address<b> as </b><span style=\"color: maroon\">locationTarget</span><b> then</b><span style=\"color: navy\"> {\r\n</span> locationSource<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">locationSource</span><b> then </b>contactPointToContactPoint<span style=\"color: navy\">(</span><span style=\"color: maroon\">locationSource</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">locationTarget</span><span style=\"color: navy\">)</span> <i>"set org address"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"set address"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>createCompositionEncounterResource<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">date</span>, <b>source</b> <span style=\"color: maroon\">pid</span>, <b>source</b> <span style=\"color: maroon\">type</span><span style=\"color: navy\"> : </span>Coding, <b>source</b> <span style=\"color: maroon\">eid</span>, <b>target</b> <span style=\"color: maroon\">encounter</span><span style=\"color: navy\"> : </span>Encounter<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> date<span style=\"color: navy\"><b> -> </b></span>encounter.id = <span style=\"color: maroon\">eid</span> <i>"set id"</i><span style=\"color: navy\">;</span>\r\n date<span style=\"color: navy\"><b> -> </b></span>encounter.status = <span style=\"color: blue\">'finished'</span> <i>"set status"</i><span style=\"color: navy\">;</span>\r\n pid<span style=\"color: navy\"><b> -> </b></span> encounter.subject<b> as </b><span style=\"color: maroon\">subject</span><span style=\"color: navy\">, </span> subject.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Patient/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>"set subject"</i><span style=\"color: navy\">;</span>\r\n date<span style=\"color: navy\"><b> -> </b></span> encounter.period<b> as </b><span style=\"color: maroon\">period</span><span style=\"color: navy\">, </span> period.start = <span style=\"color: maroon\">date</span> <i>"set date"</i><span style=\"color: navy\">;</span>\r\n type<span style=\"color: navy\"><b> -> </b></span>encounter.class = <span style=\"color: maroon\">type</span> <i>"set type"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>" ] ; # fhir:url [ fhir:v "http://worldhealthorganization.github.io/smart-ot/StructureMap/AFROMRCIFLogicalModelToResources"^^xsd:anyURI] ; # fhir:version [ fhir:v "0.2.1"] ; # fhir:name [ fhir:v "AFROMRCIFLogicalModelToResources"] ; # fhir:status [ fhir:v "draft"] ; # fhir:date [ fhir:v "2023-11-07T05:59:29+00:00"^^xsd:dateTime] ; # fhir:publisher [ fhir:v "WHO"] ; # fhir:contact ( [ fhir:name [ fhir:v "WHO" ] ; ( fhir:telecom [ fhir:system [ fhir:v "url" ] ; fhir:value [ fhir:v "http://who.int" ] ] ) ] ) ; # fhir:jurisdiction ( [ ( fhir:coding [ fhir:system [ fhir:v "http://unstats.un.org/unsd/methods/m49/m49.htm"^^xsd:anyURI ] ; fhir:code [ fhir:v "001" ] ] ) ] ) ; # fhir:structure ( [ fhir:url [ fhir:v "http://worldhealthorganization.github.io/smart-ot/StructureDefinition/AFROMRCIF"^^xsd:anyURI ; fhir:link <http://worldhealthorganization.github.io/smart-ot/StructureDefinition/AFROMRCIF> ] ; fhir:mode [ fhir:v "source" ] ; fhir:alias [ fhir:v "MeaslesLogicalModel" ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/Bundle"^^xsd:anyURI ; fhir:link <http://hl7.org/fhir/StructureDefinition/Bundle> ] ; fhir:mode [ fhir:v "target" ] ; fhir:alias [ fhir:v "MeaslesCIFBundle" ] ] [ fhir:url [ fhir:v "http://worldhealthorganization.github.io/smart-ot/StructureDefinition/MeaslesCIFComposition"^^xsd:anyURI ; fhir:link <http://worldhealthorganization.github.io/smart-ot/StructureDefinition/MeaslesCIFComposition> ] ; fhir:mode [ fhir:v "target" ] ; fhir:alias [ fhir:v "MeaslesCIFComposition" ] ] ) ; # fhir:import ( [ fhir:v "http://worldhealthorganization.github.io/smart-ot/StructureMap/MetaDataTypesHelper"^^xsd:anyURI ; fhir:link <http://worldhealthorganization.github.io/smart-ot/StructureMap/MetaDataTypesHelper> ] ) ; # fhir:group ( [ fhir:name [ fhir:v "MRCIFLogicalModelToResources" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "lm" ] ; fhir:type [ fhir:v "AFROMRCIF" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "bundle" ] ; fhir:type [ fhir:v "Bundle" ] ; fhir:mode [ fhir:v "target" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set bundle type" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "type" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "document" ] ] ) ] ) ] [ fhir:name [ fhir:v "set id" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "bid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "bid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set entries" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "cid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "pid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "prid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "oid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "eid" ] ; fhir:transform [ fhir:v "uuid" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "map composition resource" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "composition" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Composition" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "cid" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "lm" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "LmToComposition" ] ; ( fhir:variable [ fhir:v "lm" ] [ fhir:v "composition" ] [ fhir:v "cid" ] [ fhir:v "pid" ] [ fhir:v "prid" ] [ fhir:v "oid" ] [ fhir:v "eid" ] ) ] ) ] [ fhir:name [ fhir:v "map patient resource" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "pid" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "patient" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Patient" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "create patient" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "Demographics" ] ; fhir:variable [ fhir:v "demographics" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "demographics" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "DemographicsToPatient" ] ; ( fhir:variable [ fhir:v "demographics" ] [ fhir:v "patient" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "set patient as entry" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "patient" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "map practitioner resource" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "prid" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "practitioner" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Practitioner" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "create practitioner" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "Classification" ] ; fhir:variable [ fhir:v "classification" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "classification" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "classificationToPractitioner" ] ; ( fhir:variable [ fhir:v "classification" ] [ fhir:v "practitioner" ] [ fhir:v "prid" ] ) ] ) ] [ fhir:name [ fhir:v "set practitioner as entry" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "practitioner" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "map organization resource" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "oid" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "organization" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Organization" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "create organization" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "ReportingSource" ] ; fhir:variable [ fhir:v "reportingSource" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "reportingSource" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "ReportingSourceToOrganization" ] ; ( fhir:variable [ fhir:v "reportingSource" ] [ fhir:v "organization" ] [ fhir:v "oid" ] ) ] ) ] [ fhir:name [ fhir:v "set organization as entry" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "organization" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "map encounter resource" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "eid" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "encounter" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Encounter" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set encounter" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "lmCaseInvestigation" ] ; fhir:variable [ fhir:v "var" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set encounter" ] ; ( fhir:source [ fhir:context [ fhir:v "var" ] ; fhir:element [ fhir:v "DateOfConsultation" ] ; fhir:variable [ fhir:v "date" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "create encounter" ] ; ( fhir:source [ fhir:context [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "type" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "type" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "AMB" ] ] ) ] [ fhir:context [ fhir:v "type" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://terminology.hl7.org/CodeSystem/v3-ActCode" ] ] ) ] [ fhir:context [ fhir:v "type" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "ambulatory" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createCompositionEncounterResource" ] ; ( fhir:variable [ fhir:v "date" ] [ fhir:v "pid" ] [ fhir:v "type" ] [ fhir:v "eid" ] [ fhir:v "encounter" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set encounter as entry" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "encounter" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set clinical data" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "lm" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "mapClinicalToObservations" ] ; ( fhir:variable [ fhir:v "lm" ] [ fhir:v "bundle" ] [ fhir:v "composition" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "set labs data" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "lm" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "mapLabsToDiagnosticReport" ] ; ( fhir:variable [ fhir:v "lm" ] [ fhir:v "bundle" ] [ fhir:v "composition" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "set immunization data" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "lm" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "mapVaccinationStatusToImmunization" ] ; ( fhir:variable [ fhir:v "lm" ] [ fhir:v "bundle" ] [ fhir:v "composition" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "set classification" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "lm" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "mapClassificationToConditions" ] ; ( fhir:variable [ fhir:v "lm" ] [ fhir:v "bundle" ] [ fhir:v "composition" ] [ fhir:v "pid" ] [ fhir:v "eid" ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "mapClassificationToConditions" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "lm" ] ; fhir:type [ fhir:v "MeaslesLogicalModel" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "bundle" ] ; fhir:type [ fhir:v "Bundle" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "composition" ] ; fhir:type [ fhir:v "MeaslesCIFComposition" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "pid" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "eid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set section" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "section" ] ; fhir:variable [ fhir:v "section" ] ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "title" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Classification" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "Set classification" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "Classification" ] ; fhir:variable [ fhir:v "classification" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "id" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "id" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Condition/" ] ] [ fhir:value [ fhir:v "id" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "condition" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Condition" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set id" ] ; ( fhir:source [ fhir:context [ fhir:v "classification" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "condition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "id" ] ] ) ] ) ] [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "classification" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "condition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "verificationStatus" ] ; fhir:variable [ fhir:v "tgtStatus" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "status" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "status" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "confirmed" ] ] ) ] [ fhir:context [ fhir:v "status" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://terminology.hl7.org/CodeSystem/condition-ver-status" ] ] ) ] [ fhir:context [ fhir:v "status" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Confirmed" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "mapCodingtoCodeableConcept" ] ; ( fhir:variable [ fhir:v "status" ] [ fhir:v "tgtStatus" ] ) ] ) ] [ fhir:name [ fhir:v "set subject" ] ; ( fhir:source [ fhir:context [ fhir:v "classification" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "condition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "subject" ] ; fhir:variable [ fhir:v "subject" ] ] [ fhir:context [ fhir:v "subject" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Patient/" ] ] [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set code" ] ; ( fhir:source [ fhir:context [ fhir:v "classification" ] ; fhir:element [ fhir:v "FinalClassification" ] ; fhir:variable [ fhir:v "coding" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "condition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:variable [ fhir:v "code" ] ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "mapCodingtoCodeableConcept" ] ; ( fhir:variable [ fhir:v "coding" ] [ fhir:v "code" ] ) ] ) ] [ fhir:name [ fhir:v "set subject" ] ; ( fhir:source [ fhir:context [ fhir:v "classification" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "condition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "encounter" ] ; fhir:variable [ fhir:v "encounter" ] ] [ fhir:context [ fhir:v "encounter" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Encounter/" ] ] [ fhir:value [ fhir:v "eid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "classification" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "condition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "category" ] ; fhir:variable [ fhir:v "tgt" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "status" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "status" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "encounter-diagnosis" ] ] ) ] [ fhir:context [ fhir:v "status" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://terminology.hl7.org/CodeSystem/condition-category" ] ] ) ] [ fhir:context [ fhir:v "status" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Encounter Diagnosis" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "mapCodingtoCodeableConcept" ] ; ( fhir:variable [ fhir:v "status" ] [ fhir:v "tgt" ] ) ] ) ] [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "classification" ] ; fhir:element [ fhir:v "ClassificationDate" ] ; fhir:variable [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "condition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "recordedDate" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "date" ] ] ) ] ) ] [ fhir:name [ fhir:v "set person" ] ; ( fhir:source [ fhir:context [ fhir:v "classification" ] ; fhir:element [ fhir:v "ClassifiedBy" ] ; fhir:variable [ fhir:v "person" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "rpid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "rpid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "RelatedPerson/" ] ] [ fhir:value [ fhir:v "rpid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "recorder" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "RelatedPerson" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set id" ] ; ( fhir:source [ fhir:context [ fhir:v "person" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "recorder" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "rpid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "person" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "recorder" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:variable [ fhir:v "targetName" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "name" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "HumanName" ] ] ) ] [ fhir:context [ fhir:v "name" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "text" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "person" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "humanNameToHumanName" ] ; ( fhir:variable [ fhir:v "name" ] [ fhir:v "targetName" ] ) ] ) ] [ fhir:name [ fhir:v "set patient" ] ; ( fhir:source [ fhir:context [ fhir:v "person" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "recorder" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "patient" ] ; fhir:variable [ fhir:v "patient" ] ] [ fhir:context [ fhir:v "patient" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Patient/" ] ] [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "mapContactTracing" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "lm" ] ; fhir:type [ fhir:v "MeaslesLogicalModel" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "bundle" ] ; fhir:type [ fhir:v "Bundle" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "composition" ] ; fhir:type [ fhir:v "MeaslesCIFComposition" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "pid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "section" ] ; fhir:variable [ fhir:v "section" ] ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "title" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Contact Tracing" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "mapClinicalToObservations" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "lm" ] ; fhir:type [ fhir:v "AFROMRCIF" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "bundle" ] ; fhir:type [ fhir:v "Bundle" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "composition" ] ; fhir:type [ fhir:v "Composition" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "pid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set section" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "section" ] ; fhir:variable [ fhir:v "section" ] ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "title" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Clinical Data, Follow up and Treatment" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set clinical" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "Clinical" ] ; fhir:variable [ fhir:v "clinical" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "clinical" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set fever" ] ; ( fhir:source [ fhir:context [ fhir:v "clinical" ] ; fhir:element [ fhir:v "Fever" ] ; fhir:variable [ fhir:v "fever" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "fever" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "fever" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DE31" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Fever" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "fever" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "fever" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "fever" ] [ fhir:v "coding" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set Rash" ] ; ( fhir:source [ fhir:context [ fhir:v "clinical" ] ; fhir:element [ fhir:v "Rash" ] ; fhir:variable [ fhir:v "rash" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "rash" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "rash" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DE35" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Rash" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "rash" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "rash" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "rash" ] [ fhir:v "coding" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "lmCaseInvestigation" ] ; fhir:variable [ fhir:v "var" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set start date" ] ; ( fhir:source [ fhir:context [ fhir:v "var" ] ; fhir:element [ fhir:v "RashOnsetDate" ] ; fhir:variable [ fhir:v "onsetDate" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "period" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Period" ] ] ) ] [ fhir:context [ fhir:v "period" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "start" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "onsetDate" ] ] ) ] [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "effective" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "period" ] ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set cough" ] ; ( fhir:source [ fhir:context [ fhir:v "clinical" ] ; fhir:element [ fhir:v "Cough" ] ; fhir:variable [ fhir:v "cough" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "cough" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "cough" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DE39" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Cough" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "cough" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "cough" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "cough" ] [ fhir:v "coding" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set conjunctivitis" ] ; ( fhir:source [ fhir:context [ fhir:v "clinical" ] ; fhir:element [ fhir:v "Conjunctivitis" ] ; fhir:variable [ fhir:v "conjunctivitis" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "conjunctivitis" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "conjunctivitis" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DE43" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Conjunctivitis" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "conjunctivitis" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "conjunctivitis" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "conjunctivitis" ] [ fhir:v "coding" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set coryza" ] ; ( fhir:source [ fhir:context [ fhir:v "clinical" ] ; fhir:element [ fhir:v "Coryza" ] ; fhir:variable [ fhir:v "coryza" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "coryza" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "coryza" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DE47" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coryza" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "coryza" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "coryza" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "coryza" ] [ fhir:v "coding" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set lymphadenopathy" ] ; ( fhir:source [ fhir:context [ fhir:v "clinical" ] ; fhir:element [ fhir:v "Lymphadenopathy" ] ; fhir:variable [ fhir:v "lymphadenopathy" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "lymphadenopathy" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "lymphadenopathy" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DE51" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Lymphadenopathy" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "lymphadenopathy" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "lymphadenopathy" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "lymphadenopathy" ] [ fhir:v "coding" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set jointPain" ] ; ( fhir:source [ fhir:context [ fhir:v "clinical" ] ; fhir:element [ fhir:v "JointPain" ] ; fhir:variable [ fhir:v "jointPain" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "jointPain" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "jointPain" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DE55" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Joint Pain" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "jointPain" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "jointPain" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "jointPain" ] [ fhir:v "coding" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set outcome" ] ; ( fhir:source [ fhir:context [ fhir:v "clinical" ] ; fhir:element [ fhir:v "Outcome" ] ; fhir:variable [ fhir:v "outcome" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "outcome" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "outcome" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DE63" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Outcome" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "outcome" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "outcome" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "outcome" ] [ fhir:v "coding" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set travel" ] ; ( fhir:source [ fhir:context [ fhir:v "clinical" ] ; fhir:element [ fhir:v "travelledOutside" ] ; fhir:variable [ fhir:v "travel" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "travel" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "travel" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DE67" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Outcome" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "travel" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "travel" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "travel" ] [ fhir:v "coding" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set infection" ] ; ( fhir:source [ fhir:context [ fhir:v "clinical" ] ; fhir:element [ fhir:v "HistoryOfHospitalization" ] ; fhir:variable [ fhir:v "admitted" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "admitted" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "admitted" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DE59" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://worldhealthorganization.github.io/smart-ot/AFROMRCIF" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Outcome" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "admitted" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "admitted" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "admitted" ] [ fhir:v "coding" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "createObservationResource" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "src" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "coding" ] ; fhir:type [ fhir:v "Coding" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "observation" ] ; fhir:type [ fhir:v "Observation" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "pid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set code" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "code" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "code" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "coding" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "coding" ] ] ) ] [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "code" ] ] ) ] ) ] [ fhir:name [ fhir:v "set value" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "value" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "value" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "coding" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "src" ] ] ) ] [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "value" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "value" ] ] ) ] ) ] [ fhir:name [ fhir:v "set status" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "status" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "registered" ] ] ) ] ) ] [ fhir:name [ fhir:v "set subject" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "subject" ] ; fhir:variable [ fhir:v "subject" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set subject" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "subject" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Patient/" ] ] [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "mapLabsToDiagnosticReport" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "lm" ] ; fhir:type [ fhir:v "MeaslesLogicalModel" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "bundle" ] ; fhir:type [ fhir:v "Bundle" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "composition" ] ; fhir:type [ fhir:v "MeaslesCIFComposition" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "pid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set section" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "section" ] ; fhir:variable [ fhir:v "section" ] ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "title" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Specimens & Laboratory Testing" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set diagnosticReport" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "LaboratoryResults" ] ; fhir:variable [ fhir:v "labs" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "id" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "id" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DiagnosticReport/" ] ] [ fhir:value [ fhir:v "id" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "diagnosticReport" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "DiagnosticReport" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set id" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "diagnosticReport" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "id" ] ] ) ] ) ] [ fhir:name [ fhir:v "set status" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "diagnosticReport" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "status" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "registered" ] ] ) ] ) ] [ fhir:name [ fhir:v "set subject" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "diagnosticReport" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "subject" ] ; fhir:variable [ fhir:v "subject" ] ] [ fhir:context [ fhir:v "subject" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Patient/" ] ] [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set code" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "Antigen" ] ; fhir:variable [ fhir:v "antigen" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "diagnosticReport" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:variable [ fhir:v "code" ] ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "mapCodingtoCodeableConcept" ] ; ( fhir:variable [ fhir:v "antigen" ] [ fhir:v "code" ] ) ] ) ] [ fhir:name [ fhir:v "set specimen" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "id" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "id" ] ] ) ] [ fhir:context [ fhir:v "diagnosticReport" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "specimen" ] ; fhir:variable [ fhir:v "refSpecimen" ] ] [ fhir:context [ fhir:v "refSpecimen" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Specimen/" ] ] [ fhir:value [ fhir:v "id" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "specimen" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Specimen" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "Set idn" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "specimen" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "id" ] ] ) ] ) ] [ fhir:name [ fhir:v "set date" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "SpecimenCollectionDate" ] ; fhir:variable [ fhir:v "collectDate" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "specimen" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "collection" ] ; fhir:variable [ fhir:v "collection" ] ] [ fhir:context [ fhir:v "collection" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "collected" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "collectDate" ] ] ) ] ) ] [ fhir:name [ fhir:v "set date" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "SpecimenRecdDate" ] ; fhir:variable [ fhir:v "recdDate" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "specimen" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "receivedTime" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "recdDate" ] ] ) ] ) ] [ fhir:name [ fhir:v "set type" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "SampleType" ] ; fhir:variable [ fhir:v "sampleType" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "specimen" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "type" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "sampleType" ] ] ) ] ) ] [ fhir:name [ fhir:v "set note" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "SpecimenNumber" ] ; fhir:variable [ fhir:v "number" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set note" ] ; ( fhir:source [ fhir:context [ fhir:v "number" ] ; fhir:element [ fhir:v "display" ] ; fhir:variable [ fhir:v "text" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "specimen" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "note" ] ; fhir:variable [ fhir:v "note" ] ] [ fhir:context [ fhir:v "note" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "text" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "text" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set performer" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "id" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "id" ] ] ) ] [ fhir:context [ fhir:v "diagnosticReport" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "performer" ] ; fhir:variable [ fhir:v "performer" ] ] [ fhir:context [ fhir:v "performer" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Organization/" ] ] [ fhir:value [ fhir:v "id" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "perfOrg" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Organization" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set name" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "LabName" ] ; fhir:variable [ fhir:v "labName" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "perfOrg" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "labName" ] ] ) ] ) ] [ fhir:name [ fhir:v "set id" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "perfOrg" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "id" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set results" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "diagnosticReport" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "result" ] ; fhir:variable [ fhir:v "result" ] ] [ fhir:context [ fhir:v "result" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation/" ] ] [ fhir:value [ fhir:v "obsid" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observation" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obsid" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set testType" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "TypeOfTest" ] ; fhir:variable [ fhir:v "testType" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "testType" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set obs" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "Results" ] ; fhir:variable [ fhir:v "result" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "result" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createObservationResource" ] ; ( fhir:variable [ fhir:v "result" ] [ fhir:v "testType" ] [ fhir:v "observation" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "set start date" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "LabResultsDate" ] ; fhir:variable [ fhir:v "resultDate" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observation" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "effective" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "resultDate" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set code" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "TypeOfTest" ] ; fhir:variable [ fhir:v "testType" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "diagnosticReport" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "testType" ] ] ) ] ) ] [ fhir:name [ fhir:v "set date" ] ; ( fhir:source [ fhir:context [ fhir:v "labs" ] ; fhir:element [ fhir:v "LabResultsDate" ] ; fhir:variable [ fhir:v "resultDate" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "diagnosticReport" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "effective" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "resultDate" ] ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "createImmunizationResource" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "vax" ] ; fhir:type [ fhir:v "AFROMRCIFVaccinationStatus" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "bundle" ] ; fhir:type [ fhir:v "Bundle" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "section" ] ; fhir:type [ fhir:v "Element" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "pid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "ad" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "id" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "bundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "urn:uuid:" ] ] [ fhir:value [ fhir:v "id" ] ] ) ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "sectionEntry" ] ] [ fhir:context [ fhir:v "sectionEntry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Immunization/" ] ] [ fhir:value [ fhir:v "id" ] ] ) ] [ fhir:context [ fhir:v "entry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "immunization" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Immunization" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set id" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "immunization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "id" ] ] ) ] ) ] [ fhir:name [ fhir:v "set status" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "immunization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "status" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "completed" ] ] ) ] ) ] [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "immunization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "vaccineCode" ] ; fhir:variable [ fhir:v "code" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set code" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "VaccineType" ] ; fhir:variable [ fhir:v "vaccineType" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "vaccineType" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "mapCodingtoCodeableConcept" ] ; ( fhir:variable [ fhir:v "vaccineType" ] [ fhir:v "code" ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "Source" ] ; fhir:variable [ fhir:v "source" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "immunization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reportOrigin" ] ; fhir:variable [ fhir:v "origin" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set report origin" ] ; ( fhir:source [ fhir:context [ fhir:v "source" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "source" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "mapCodingtoCodeableConcept" ] ; ( fhir:variable [ fhir:v "source" ] [ fhir:v "origin" ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set date" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "LastDoseDate" ] ; fhir:variable [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "immunization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "occurrence" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "date" ] ] ) ] ) ] [ fhir:name [ fhir:v "set dosenumber" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "NumberOfDoses" ] ; fhir:variable [ fhir:v "doses" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "doses" ] ; fhir:element [ fhir:v "display" ] ; fhir:variable [ fhir:v "seriesDose" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "immunization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "protocolApplied" ] ; fhir:variable [ fhir:v "protocol" ] ] [ fhir:context [ fhir:v "protocol" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "series" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "seriesDose" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set subject" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "immunization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "patient" ] ; fhir:variable [ fhir:v "subject" ] ] [ fhir:context [ fhir:v "subject" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Patient/" ] ] [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "mapVaccinationStatusToImmunization" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "lm" ] ; fhir:type [ fhir:v "MeaslesLogicalModel" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "bundle" ] ; fhir:type [ fhir:v "Bundle" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "composition" ] ; fhir:type [ fhir:v "MeaslesCIFComposition" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "pid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set section" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "section" ] ; fhir:variable [ fhir:v "section" ] ] [ fhir:context [ fhir:v "section" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "title" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Vaccination History" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set status" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "VaccinationStatus" ] ; fhir:variable [ fhir:v "vax" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "do" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "NumberOfDoses" ] ; fhir:variable [ fhir:v "doses" ] ; fhir:condition [ fhir:v "code = '99'" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "doses" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "NumberOfDoses" ] ; fhir:variable [ fhir:v "doses" ] ; fhir:condition [ fhir:v "code = '1'" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "doses" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "do1" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "LastDoseDate" ] ; fhir:variable [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "date" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set doses" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "NumberOfDoses" ] ; fhir:variable [ fhir:v "doses" ] ; fhir:condition [ fhir:v "code = '2'" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "do2" ] ; ( fhir:source [ fhir:context [ fhir:v "doses" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "doses" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "do" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "LastDoseDate" ] ; fhir:variable [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "date" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set doses" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "NumberOfDoses" ] ; fhir:variable [ fhir:v "doses" ] ; fhir:condition [ fhir:v "code = '3'" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "do" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "doses" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "do" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "doses" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "do" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "LastDoseDate" ] ; fhir:variable [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "date" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set doses" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "NumberOfDoses" ] ; fhir:variable [ fhir:v "doses" ] ; fhir:condition [ fhir:v "code = '4'" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "do" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "doses" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "do" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "doses" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "do" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "doses" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] [ fhir:name [ fhir:v "do" ] ; ( fhir:source [ fhir:context [ fhir:v "vax" ] ; fhir:element [ fhir:v "LastDoseDate" ] ; fhir:variable [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "date" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "createImmunizationResource" ] ; ( fhir:variable [ fhir:v "vax" ] [ fhir:v "bundle" ] [ fhir:v "section" ] [ fhir:v "pid" ] ) ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "LmToComposition" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "lm" ] ; fhir:type [ fhir:v "AFROMRCIF" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "composition" ] ; fhir:type [ fhir:v "Composition" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "cid" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "pid" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "prid" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "oid" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "eid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set id" ] ; ( fhir:source [ fhir:context [ fhir:v "cid" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "cid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set status" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "status" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "final" ] ] ) ] ) ] [ fhir:name [ fhir:v "set" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "ReportingSource" ] ; fhir:variable [ fhir:v "src" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set identifier" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "UniqueId" ] ; fhir:variable [ fhir:v "EPIDno" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "identifier" ] ; fhir:variable [ fhir:v "identifier" ] ] [ fhir:context [ fhir:v "identifier" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "value" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "EPIDno" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set title" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "title" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "PAHO Measles Case Investigation Form" ] ] ) ] ) ] [ fhir:name [ fhir:v "set type" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coding" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "55751-2" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Public health Case report" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "code" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "code" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "coding" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "coding" ] ] ) ] [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "type" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "code" ] ] ) ] ) ] [ fhir:name [ fhir:v "set date reported local" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ; fhir:element [ fhir:v "CaseInvestigation" ] ; fhir:variable [ fhir:v "var" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "var" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set date" ] ; ( fhir:source [ fhir:context [ fhir:v "var" ] ; fhir:element [ fhir:v "DateReportedLocal" ] ; fhir:variable [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "date" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "date" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set subject" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "subject" ] ; fhir:variable [ fhir:v "subject" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set subject" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "subject" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Patient/" ] ] [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set author practitioner" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "author" ] ; fhir:variable [ fhir:v "practitioner" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set author practitioner" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "practitioner" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Practitioner/" ] ] [ fhir:value [ fhir:v "prid" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set author org" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "author" ] ; fhir:variable [ fhir:v "institution" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set author institution" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "institution" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Organization/" ] ] [ fhir:value [ fhir:v "oid" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set encounter" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "composition" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "encounter" ] ; fhir:variable [ fhir:v "encounter" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set encounter" ] ; ( fhir:source [ fhir:context [ fhir:v "lm" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "encounter" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Encounter/" ] ] [ fhir:value [ fhir:v "eid" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "DemographicsToPatient" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "demographics" ] ; fhir:type [ fhir:v "DemographicsLogicalModel" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "patient" ] ; fhir:type [ fhir:v "MeaslesPatient" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "pid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set patient id" ] ; ( fhir:source [ fhir:context [ fhir:v "pid" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "patient" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "Set name" ] ; ( fhir:source [ fhir:context [ fhir:v "demographics" ] ; fhir:element [ fhir:v "Name" ] ; fhir:variable [ fhir:v "sourceName" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "patient" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:variable [ fhir:v "targetName" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "Copy name" ] ; ( fhir:source [ fhir:context [ fhir:v "sourceName" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "sourceName" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "humanNameToHumanName" ] ; ( fhir:variable [ fhir:v "sourceName" ] [ fhir:v "targetName" ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set date of birth" ] ; ( fhir:source [ fhir:context [ fhir:v "demographics" ] ; fhir:element [ fhir:v "DateOfBirth" ] ; fhir:variable [ fhir:v "dob" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "patient" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "birthDate" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "dob" ] ] ) ] ) ] [ fhir:name [ fhir:v "set sex" ] ; ( fhir:source [ fhir:context [ fhir:v "demographics" ] ; fhir:element [ fhir:v "Sex" ] ; fhir:variable [ fhir:v "sex" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "patient" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "gender" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "sex" ] ] ) ] ) ] [ fhir:name [ fhir:v "set address" ] ; ( fhir:source [ fhir:context [ fhir:v "demographics" ] ; fhir:element [ fhir:v "PlaceOfResidence" ] ; fhir:variable [ fhir:v "sourceAddress" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "patient" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "address" ] ; fhir:variable [ fhir:v "targetAddress" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "Copy Address" ] ; ( fhir:source [ fhir:context [ fhir:v "sourceAddress" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "sourceAddress" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "addressToAddress" ] ; ( fhir:variable [ fhir:v "sourceAddress" ] [ fhir:v "targetAddress" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "classificationToPractitioner" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "var" ] ; fhir:type [ fhir:v "AFROMRCIFClassification" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "practitioner" ] ; fhir:type [ fhir:v "Practitioner" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "prid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set id" ] ; ( fhir:source [ fhir:context [ fhir:v "prid" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "practitioner" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "prid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set name" ] ; ( fhir:source [ fhir:context [ fhir:v "var" ] ; fhir:element [ fhir:v "ReportedBy" ] ; fhir:variable [ fhir:v "name" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "practitioner" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:variable [ fhir:v "humanName" ] ] [ fhir:context [ fhir:v "humanName" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "text" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "name" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "ReportingSourceToOrganization" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "reportingSource" ] ; fhir:type [ fhir:v "ReportingSourceLogicalModel" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "organization" ] ; fhir:type [ fhir:v "Organization" ] ; fhir:mode [ fhir:v "target" ] ] [ fhir:name [ fhir:v "oid" ] ; fhir:mode [ fhir:v "source" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set id" ] ; ( fhir:source [ fhir:context [ fhir:v "oid" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "organization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "oid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set name" ] ; ( fhir:source [ fhir:context [ fhir:v "reportingSource" ] ; fhir:element [ fhir:v "HealthServiceName" ] ; fhir:variable [ fhir:v "name" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "organization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "name" ] ] ) ] ) ] [ fhir:name [ fhir:v "set phone" ] ; ( fhir:source [ fhir:context [ fhir:v "reportingSource" ] ; fhir:element [ fhir:v "HealthServiceTelephone" ] ; fhir:variable [ fhir:v "phoneSource" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "organization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "contact" ] ; fhir:variable [ fhir:v "contactDetails" ] ] [ fhir:context [ fhir:v "contactDetails" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "telecom" ] ; fhir:variable [ fhir:v "phoneTarget" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set org contact" ] ; ( fhir:source [ fhir:context [ fhir:v "phoneSource" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "phoneSource" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "contactPointToContactPoint" ] ; ( fhir:variable [ fhir:v "phoneSource" ] [ fhir:v "phoneTarget" ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set address" ] ; ( fhir:source [ fhir:context [ fhir:v "reportingSource" ] ; fhir:element [ fhir:v "PlaceOfReporting" ] ; fhir:variable [ fhir:v "locationSource" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "organization" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "contact" ] ; fhir:variable [ fhir:v "contactDetails" ] ] [ fhir:context [ fhir:v "contactDetails" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "address" ] ; fhir:variable [ fhir:v "locationTarget" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set org address" ] ; ( fhir:source [ fhir:context [ fhir:v "locationSource" ] ] ) ; ( fhir:target [ fhir:contextType [ fhir:v "variable" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "locationSource" ] ] ) ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "contactPointToContactPoint" ] ; ( fhir:variable [ fhir:v "locationSource" ] [ fhir:v "locationTarget" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "createCompositionEncounterResource" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "date" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "pid" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "type" ] ; fhir:type [ fhir:v "Coding" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "eid" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "encounter" ] ; fhir:type [ fhir:v "Encounter" ] ; fhir:mode [ fhir:v "target" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "set id" ] ; ( fhir:source [ fhir:context [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "encounter" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "eid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set status" ] ; ( fhir:source [ fhir:context [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "encounter" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "status" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "finished" ] ] ) ] ) ] [ fhir:name [ fhir:v "set subject" ] ; ( fhir:source [ fhir:context [ fhir:v "pid" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "encounter" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "subject" ] ; fhir:variable [ fhir:v "subject" ] ] [ fhir:context [ fhir:v "subject" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "append" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Patient/" ] ] [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "set date" ] ; ( fhir:source [ fhir:context [ fhir:v "date" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "encounter" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "period" ] ; fhir:variable [ fhir:v "period" ] ] [ fhir:context [ fhir:v "period" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "start" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "date" ] ] ) ] ) ] [ fhir:name [ fhir:v "set type" ] ; ( fhir:source [ fhir:context [ fhir:v "type" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "encounter" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "class" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "type" ] ] ) ] ) ] ) ] ) . #
IG © 2021+ WHO. Package fhir.worldhealthorganization.smart-ot#0.2.1 based on FHIR 4.0.1. Generated 2023-11-07
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