WHO SMART Guideline: Surveillance and Outbreak Toolkit
0.2.1 - CI Build
WHO SMART Guideline: Surveillance and Outbreak Toolkit
0.2.1 - CI Build
WHO SMART Guideline: Surveillance and Outbreak Toolkit, published by WHO. This is not an authorized publication; it is the continuous build for version 0.2.1. This version is based on the current content of https://github.com/WorldHealthOrganization/smart-ot and changes regularly. See the Directory of published versions
| Draft as of 2023-11-07 |
{
"resourceType" : "StructureMap",
"id" : "MetaDataTypesHelper",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><pre class=\"fml\">\r\n<b>map</b><span style=\"color: navy\"> "</span>http://worldhealthorganization.github.io/smart-ot/StructureMap/MetaDataTypesHelper<span style=\"color: navy\">" = "</span>MetaDataTypesHelper<span style=\"color: navy\">"\r\n\r\n</span><b>group </b>addressToAddress<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">sourceAddress</span>, <b>target</b> <span style=\"color: maroon\">targetAddress</span><span style=\"color: navy\"> : </span>Address<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> sourceAddress.use<b> as </b><span style=\"color: maroon\">use</span><span style=\"color: navy\"><b> -> </b></span>targetAddress.use = <span style=\"color: maroon\">use</span> <i>"Copy use"</i><span style=\"color: navy\">;</span>\r\n sourceAddress.type<b> as </b><span style=\"color: maroon\">type</span><span style=\"color: navy\"><b> -> </b></span>targetAddress.type = <span style=\"color: maroon\">type</span> <i>"Copy type"</i><span style=\"color: navy\">;</span>\r\n sourceAddress.text<b> as </b><span style=\"color: maroon\">text</span><span style=\"color: navy\"><b> -> </b></span>targetAddress.text = <span style=\"color: maroon\">text</span> <i>"Copy text"</i><span style=\"color: navy\">;</span>\r\n sourceAddress.line<b> as </b><span style=\"color: maroon\">line</span><span style=\"color: navy\"><b> -> </b></span>targetAddress.line = <span style=\"color: maroon\">line</span> <i>"Copy line"</i><span style=\"color: navy\">;</span>\r\n sourceAddress.city<b> as </b><span style=\"color: maroon\">city</span><span style=\"color: navy\"><b> -> </b></span>targetAddress.city = <span style=\"color: maroon\">city</span> <i>"Copy city"</i><span style=\"color: navy\">;</span>\r\n sourceAddress.district<b> as </b><span style=\"color: maroon\">district</span><span style=\"color: navy\"><b> -> </b></span>targetAddress.district = <span style=\"color: maroon\">district</span> <i>"Copy district"</i><span style=\"color: navy\">;</span>\r\n sourceAddress.state<b> as </b><span style=\"color: maroon\">state</span><span style=\"color: navy\"><b> -> </b></span>targetAddress.state = <span style=\"color: maroon\">state</span> <i>"Copy state"</i><span style=\"color: navy\">;</span>\r\n sourceAddress.postalCode<b> as </b><span style=\"color: maroon\">postalCode</span><span style=\"color: navy\"><b> -> </b></span>targetAddress.postalCode = <span style=\"color: maroon\">postalCode</span> <i>"Copy postalCode"</i><span style=\"color: navy\">;</span>\r\n sourceAddress.country<b> as </b><span style=\"color: maroon\">country</span><span style=\"color: navy\"><b> -> </b></span>targetAddress.country = <span style=\"color: maroon\">country</span> <i>"Copy country"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">Copy the period using the previously defined group function</span>\r\n sourceAddress.period<b> as </b><span style=\"color: maroon\">sourcePeriod</span><span style=\"color: navy\"><b> -> </b></span>targetAddress.period<b> as </b><span style=\"color: maroon\">targetPeriod</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sourcePeriod<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">sourcePeriod</span><b> then </b>periodToPeriod<span style=\"color: navy\">(</span><span style=\"color: maroon\">sourcePeriod</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">targetPeriod</span><span style=\"color: navy\">)</span> <i>"Copy period"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"copy period"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>humanNameToHumanName<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">sourceName</span>, <b>target</b> <span style=\"color: maroon\">targetName</span><span style=\"color: navy\"> : </span>HumanName<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> sourceName.use<b> as </b><span style=\"color: maroon\">use</span><span style=\"color: navy\"><b> -> </b></span>targetName.use = <span style=\"color: maroon\">use</span> <i>"Copy use"</i><span style=\"color: navy\">;</span>\r\n sourceName.text<b> as </b><span style=\"color: maroon\">text</span><span style=\"color: navy\"><b> -> </b></span>targetName.text = <span style=\"color: maroon\">text</span> <i>"Copy text"</i><span style=\"color: navy\">;</span>\r\n sourceName.family<b> as </b><span style=\"color: maroon\">family</span><span style=\"color: navy\"><b> -> </b></span>targetName.family = <span style=\"color: maroon\">family</span> <i>"Copy family"</i><span style=\"color: navy\">;</span>\r\n sourceName.given<b> as </b><span style=\"color: maroon\">given</span><span style=\"color: navy\"><b> -> </b></span>targetName.given = <span style=\"color: maroon\">given</span> <i>"Copy given"</i><span style=\"color: navy\">;</span>\r\n sourceName.prefix<b> as </b><span style=\"color: maroon\">prefix</span><span style=\"color: navy\"><b> -> </b></span>targetName.prefix = <span style=\"color: maroon\">prefix</span> <i>"Copy prefix"</i><span style=\"color: navy\">;</span>\r\n sourceName.suffix<b> as </b><span style=\"color: maroon\">suffix</span><span style=\"color: navy\"><b> -> </b></span>targetName.suffix = <span style=\"color: maroon\">suffix</span> <i>"Copy suffix"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">Copy the period using the previously defined group function</span>\r\n sourceName.period<b> as </b><span style=\"color: maroon\">sourcePeriod</span><span style=\"color: navy\"><b> -> </b></span>targetName.period<b> as </b><span style=\"color: maroon\">targetPeriod</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sourcePeriod<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">sourcePeriod</span><b> then </b>periodToPeriod<span style=\"color: navy\">(</span><span style=\"color: maroon\">sourcePeriod</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">targetPeriod</span><span style=\"color: navy\">)</span> <i>"Copy period"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"copy period"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>periodToPeriod<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">sourcePeriod</span>, <b>target</b> <span style=\"color: maroon\">targetPeriod</span><span style=\"color: navy\"> : </span>Period<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> sourcePeriod.start<b> as </b><span style=\"color: maroon\">start</span><span style=\"color: navy\"><b> -> </b></span>targetPeriod.start = <span style=\"color: maroon\">start</span> <i>"set period start"</i><span style=\"color: navy\">;</span>\r\n sourcePeriod.end<b> as </b><span style=\"color: maroon\">end</span><span style=\"color: navy\"><b> -> </b></span>targetPeriod.end = <span style=\"color: maroon\">end</span> <i>"set period end"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>contactPointToContactPoint<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">sourceContact</span>, <b>target</b> <span style=\"color: maroon\">targetContact</span><span style=\"color: navy\"> : </span>ContactPoint<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> sourceContact.system<b> as </b><span style=\"color: maroon\">system</span><span style=\"color: navy\"><b> -> </b></span>targetContact.system = <span style=\"color: maroon\">system</span> <i>"Copy system"</i><span style=\"color: navy\">;</span>\r\n sourceContact.value<b> as </b><span style=\"color: maroon\">value</span><span style=\"color: navy\"><b> -> </b></span>targetContact.value = <span style=\"color: maroon\">value</span> <i>"Copy value"</i><span style=\"color: navy\">;</span>\r\n sourceContact.use<b> as </b><span style=\"color: maroon\">use</span><span style=\"color: navy\"><b> -> </b></span>targetContact.use = <span style=\"color: maroon\">use</span> <i>"Copy use"</i><span style=\"color: navy\">;</span>\r\n sourceContact.rank<b> as </b><span style=\"color: maroon\">rank</span><span style=\"color: navy\"><b> -> </b></span>targetContact.rank = <span style=\"color: maroon\">rank</span> <i>"Copy rank"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">Copy the period using the previously defined group function</span>\r\n sourceContact.period<b> as </b><span style=\"color: maroon\">sourcePeriod</span><span style=\"color: navy\"><b> -> </b></span>targetContact.period<b> as </b><span style=\"color: maroon\">targetPeriod</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sourcePeriod<span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">sourcePeriod</span><b> then </b>periodToPeriod<span style=\"color: navy\">(</span><span style=\"color: maroon\">sourcePeriod</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">targetPeriod</span><span style=\"color: navy\">)</span> <i>"Copy period"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"copy period"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>mapCodingtoCodeableConcept<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">coding</span><span style=\"color: navy\"> : </span>Coding, <b>target</b> <span style=\"color: maroon\">codeableConcept</span><span style=\"color: navy\"> : </span>CodeableConcept<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> coding<span style=\"color: navy\"><b> -> </b></span>codeableConcept.coding = <span style=\"color: maroon\">coding</span> <i>"set coding"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
},
"url" : "http://worldhealthorganization.github.io/smart-ot/StructureMap/MetaDataTypesHelper",
"version" : "0.2.1",
"name" : "MetaDataTypesHelper",
"status" : "draft",
"date" : "2023-11-07T05:59:29+00:00",
"publisher" : "WHO",
"contact" : [
{
"name" : "WHO",
"telecom" : [
{
"system" : "url",
"value" : "http://who.int"
}
]
}
],
"jurisdiction" : [
{
"coding" : [
{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}
]
}
],
"group" : [
{
"name" : "addressToAddress",
"typeMode" : "none",
"input" : [
{
"name" : "sourceAddress",
"mode" : "source"
},
{
"name" : "targetAddress",
"type" : "Address",
"mode" : "target"
}
],
"rule" : [
{
"name" : "Copy use",
"source" : [
{
"context" : "sourceAddress",
"element" : "use",
"variable" : "use"
}
],
"target" : [
{
"context" : "targetAddress",
"contextType" : "variable",
"element" : "use",
"transform" : "copy",
"parameter" : [
{
"valueId" : "use"
}
]
}
]
},
{
"name" : "Copy type",
"source" : [
{
"context" : "sourceAddress",
"element" : "type",
"variable" : "type"
}
],
"target" : [
{
"context" : "targetAddress",
"contextType" : "variable",
"element" : "type",
"transform" : "copy",
"parameter" : [
{
"valueId" : "type"
}
]
}
]
},
{
"name" : "Copy text",
"source" : [
{
"context" : "sourceAddress",
"element" : "text",
"variable" : "text"
}
],
"target" : [
{
"context" : "targetAddress",
"contextType" : "variable",
"element" : "text",
"transform" : "copy",
"parameter" : [
{
"valueId" : "text"
}
]
}
]
},
{
"name" : "Copy line",
"source" : [
{
"context" : "sourceAddress",
"element" : "line",
"variable" : "line"
}
],
"target" : [
{
"context" : "targetAddress",
"contextType" : "variable",
"element" : "line",
"transform" : "copy",
"parameter" : [
{
"valueId" : "line"
}
]
}
]
},
{
"name" : "Copy city",
"source" : [
{
"context" : "sourceAddress",
"element" : "city",
"variable" : "city"
}
],
"target" : [
{
"context" : "targetAddress",
"contextType" : "variable",
"element" : "city",
"transform" : "copy",
"parameter" : [
{
"valueId" : "city"
}
]
}
]
},
{
"name" : "Copy district",
"source" : [
{
"context" : "sourceAddress",
"element" : "district",
"variable" : "district"
}
],
"target" : [
{
"context" : "targetAddress",
"contextType" : "variable",
"element" : "district",
"transform" : "copy",
"parameter" : [
{
"valueId" : "district"
}
]
}
]
},
{
"name" : "Copy state",
"source" : [
{
"context" : "sourceAddress",
"element" : "state",
"variable" : "state"
}
],
"target" : [
{
"context" : "targetAddress",
"contextType" : "variable",
"element" : "state",
"transform" : "copy",
"parameter" : [
{
"valueId" : "state"
}
]
}
]
},
{
"name" : "Copy postalCode",
"source" : [
{
"context" : "sourceAddress",
"element" : "postalCode",
"variable" : "postalCode"
}
],
"target" : [
{
"context" : "targetAddress",
"contextType" : "variable",
"element" : "postalCode",
"transform" : "copy",
"parameter" : [
{
"valueId" : "postalCode"
}
]
}
]
},
{
"name" : "Copy country",
"source" : [
{
"context" : "sourceAddress",
"element" : "country",
"variable" : "country"
}
],
"target" : [
{
"context" : "targetAddress",
"contextType" : "variable",
"element" : "country",
"transform" : "copy",
"parameter" : [
{
"valueId" : "country"
}
]
}
]
},
{
"name" : "copy period",
"source" : [
{
"context" : "sourceAddress",
"element" : "period",
"variable" : "sourcePeriod"
}
],
"target" : [
{
"context" : "targetAddress",
"contextType" : "variable",
"element" : "period",
"variable" : "targetPeriod"
}
],
"rule" : [
{
"name" : "Copy period",
"source" : [
{
"context" : "sourcePeriod"
}
],
"target" : [
{
"contextType" : "variable",
"transform" : "copy",
"parameter" : [
{
"valueId" : "sourcePeriod"
}
]
}
],
"dependent" : [
{
"name" : "periodToPeriod",
"variable" : [
"sourcePeriod",
"targetPeriod"
]
}
]
}
]
}
]
},
{
"name" : "humanNameToHumanName",
"typeMode" : "none",
"input" : [
{
"name" : "sourceName",
"mode" : "source"
},
{
"name" : "targetName",
"type" : "HumanName",
"mode" : "target"
}
],
"rule" : [
{
"name" : "Copy use",
"source" : [
{
"context" : "sourceName",
"element" : "use",
"variable" : "use"
}
],
"target" : [
{
"context" : "targetName",
"contextType" : "variable",
"element" : "use",
"transform" : "copy",
"parameter" : [
{
"valueId" : "use"
}
]
}
]
},
{
"name" : "Copy text",
"source" : [
{
"context" : "sourceName",
"element" : "text",
"variable" : "text"
}
],
"target" : [
{
"context" : "targetName",
"contextType" : "variable",
"element" : "text",
"transform" : "copy",
"parameter" : [
{
"valueId" : "text"
}
]
}
]
},
{
"name" : "Copy family",
"source" : [
{
"context" : "sourceName",
"element" : "family",
"variable" : "family"
}
],
"target" : [
{
"context" : "targetName",
"contextType" : "variable",
"element" : "family",
"transform" : "copy",
"parameter" : [
{
"valueId" : "family"
}
]
}
]
},
{
"name" : "Copy given",
"source" : [
{
"context" : "sourceName",
"element" : "given",
"variable" : "given"
}
],
"target" : [
{
"context" : "targetName",
"contextType" : "variable",
"element" : "given",
"transform" : "copy",
"parameter" : [
{
"valueId" : "given"
}
]
}
]
},
{
"name" : "Copy prefix",
"source" : [
{
"context" : "sourceName",
"element" : "prefix",
"variable" : "prefix"
}
],
"target" : [
{
"context" : "targetName",
"contextType" : "variable",
"element" : "prefix",
"transform" : "copy",
"parameter" : [
{
"valueId" : "prefix"
}
]
}
]
},
{
"name" : "Copy suffix",
"source" : [
{
"context" : "sourceName",
"element" : "suffix",
"variable" : "suffix"
}
],
"target" : [
{
"context" : "targetName",
"contextType" : "variable",
"element" : "suffix",
"transform" : "copy",
"parameter" : [
{
"valueId" : "suffix"
}
]
}
]
},
{
"name" : "copy period",
"source" : [
{
"context" : "sourceName",
"element" : "period",
"variable" : "sourcePeriod"
}
],
"target" : [
{
"context" : "targetName",
"contextType" : "variable",
"element" : "period",
"variable" : "targetPeriod"
}
],
"rule" : [
{
"name" : "Copy period",
"source" : [
{
"context" : "sourcePeriod"
}
],
"target" : [
{
"contextType" : "variable",
"transform" : "copy",
"parameter" : [
{
"valueId" : "sourcePeriod"
}
]
}
],
"dependent" : [
{
"name" : "periodToPeriod",
"variable" : [
"sourcePeriod",
"targetPeriod"
]
}
]
}
]
}
]
},
{
"name" : "periodToPeriod",
"typeMode" : "none",
"input" : [
{
"name" : "sourcePeriod",
"mode" : "source"
},
{
"name" : "targetPeriod",
"type" : "Period",
"mode" : "target"
}
],
"rule" : [
{
"name" : "set period start",
"source" : [
{
"context" : "sourcePeriod",
"element" : "start",
"variable" : "start"
}
],
"target" : [
{
"context" : "targetPeriod",
"contextType" : "variable",
"element" : "start",
"transform" : "copy",
"parameter" : [
{
"valueId" : "start"
}
]
}
]
},
{
"name" : "set period end",
"source" : [
{
"context" : "sourcePeriod",
"element" : "end",
"variable" : "end"
}
],
"target" : [
{
"context" : "targetPeriod",
"contextType" : "variable",
"element" : "end",
"transform" : "copy",
"parameter" : [
{
"valueId" : "end"
}
]
}
]
}
]
},
{
"name" : "contactPointToContactPoint",
"typeMode" : "none",
"input" : [
{
"name" : "sourceContact",
"mode" : "source"
},
{
"name" : "targetContact",
"type" : "ContactPoint",
"mode" : "target"
}
],
"rule" : [
{
"name" : "Copy system",
"source" : [
{
"context" : "sourceContact",
"element" : "system",
"variable" : "system"
}
],
"target" : [
{
"context" : "targetContact",
"contextType" : "variable",
"element" : "system",
"transform" : "copy",
"parameter" : [
{
"valueId" : "system"
}
]
}
]
},
{
"name" : "Copy value",
"source" : [
{
"context" : "sourceContact",
"element" : "value",
"variable" : "value"
}
],
"target" : [
{
"context" : "targetContact",
"contextType" : "variable",
"element" : "value",
"transform" : "copy",
"parameter" : [
{
"valueId" : "value"
}
]
}
]
},
{
"name" : "Copy use",
"source" : [
{
"context" : "sourceContact",
"element" : "use",
"variable" : "use"
}
],
"target" : [
{
"context" : "targetContact",
"contextType" : "variable",
"element" : "use",
"transform" : "copy",
"parameter" : [
{
"valueId" : "use"
}
]
}
]
},
{
"name" : "Copy rank",
"source" : [
{
"context" : "sourceContact",
"element" : "rank",
"variable" : "rank"
}
],
"target" : [
{
"context" : "targetContact",
"contextType" : "variable",
"element" : "rank",
"transform" : "copy",
"parameter" : [
{
"valueId" : "rank"
}
]
}
]
},
{
"name" : "copy period",
"source" : [
{
"context" : "sourceContact",
"element" : "period",
"variable" : "sourcePeriod"
}
],
"target" : [
{
"context" : "targetContact",
"contextType" : "variable",
"element" : "period",
"variable" : "targetPeriod"
}
],
"rule" : [
{
"name" : "Copy period",
"source" : [
{
"context" : "sourcePeriod"
}
],
"target" : [
{
"contextType" : "variable",
"transform" : "copy",
"parameter" : [
{
"valueId" : "sourcePeriod"
}
]
}
],
"dependent" : [
{
"name" : "periodToPeriod",
"variable" : [
"sourcePeriod",
"targetPeriod"
]
}
]
}
]
}
]
},
{
"name" : "mapCodingtoCodeableConcept",
"typeMode" : "none",
"input" : [
{
"name" : "coding",
"type" : "Coding",
"mode" : "source"
},
{
"name" : "codeableConcept",
"type" : "CodeableConcept",
"mode" : "target"
}
],
"rule" : [
{
"name" : "set coding",
"source" : [
{
"context" : "coding"
}
],
"target" : [
{
"context" : "codeableConcept",
"contextType" : "variable",
"element" : "coding",
"transform" : "copy",
"parameter" : [
{
"valueId" : "coding"
}
]
}
]
}
]
}
]
}
IG © 2021+ WHO. Package fhir.worldhealthorganization.smart-ot#0.2.1 based on FHIR 4.0.1. Generated 2023-11-07
Links: Table of Contents |
QA Report
| Issues
| Version History | License