WHO SMART Guideline: Surveillance and Outbreak Toolkit
0.2.1 - CI Build
WHO SMART Guideline: Surveillance and Outbreak Toolkit, published by WHO. This is not an authorized publication; it is the continuous build for version 0.2.1. This version is based on the current content of https://github.com/WorldHealthOrganization/smart-ot and changes regularly. See the Directory of published versions
| Draft as of 2023-11-07 |
Definitions for the SOTT1Clinical logical model.
Guidance on how to interpret the contents of this table can be found here
| 0. SOTT1Clinical | |
| Short | Surveillance & Outbreak Toolkit T1 Clinical |
| Logical Model | Instances of this logical model are not marked to be the target of a Reference |
| 2. SOTT1Clinical.courseOfDisease | |
| Definition | Course of Disease |
| Short | Course of Disease |
| Control | 1..1 |
| Type | BackboneElement |
| 4. SOTT1Clinical.courseOfDisease.symptomOnsetDate | |
| Definition | date of first appearance of the signs or symptoms of the illness/disease. |
| Short | date of onset of symptoms*:____/____/______ |
| Control | 1..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 6. SOTT1Clinical.courseOfDisease.presentedToHCFDate | |
| Definition | date the case first presentated to health facility. Caution: review potential duplicate data capturing with Section 1 before inclusion. |
| Short | For this episode, date first presented to health facility:___/___/_____ |
| Control | 0..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 8. SOTT1Clinical.courseOfDisease.admitted | |
| Definition | Was the case hospitalized, admitted to a hospital or other health facility as an inpatient? |
| Short | Currently admitted in health facility ?: |
| Control | 1..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 10. SOTT1Clinical.courseOfDisease.admittedHCFName | |
| Definition | If case admitted, name of the health facility where the case was admitted. |
| Short | name: |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 12. SOTT1Clinical.courseOfDisease.outcome | |
| Definition | Outcome of illness. Where possible, verify status after a suitable period of time [user defined] and update. |
| Short | Outcome of illness* (circle): |
| Control | 1..1 |
| Binding | The codes SHALL be taken from Patient Clinical Course Outcome |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 14. SOTT1Clinical.courseOfDisease.outcomeEvaluatedDate | |
| Definition | date if the case abandon, recover or died |
| Short | date outcome was evaluated:___/___/_____ |
| Control | 1..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 16. SOTT1Clinical.courseOfDisease.outcomeDate | |
| Definition | date if the case abandon, recover or died |
| Short | date* of recovery, default or death:___/___/_____ |
| Control | 1..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 18. SOTT1Clinical.courseOfDisease.sequelae | |
| Definition | Complications of disease. To be defined based on disease. Is there a pathological condition resulting from a previous disease, injury, therapy, or other trauma |
| Short | Sequelae after recovery |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 20. SOTT1Clinical.courseOfDisease.specifySequelae | |
| Definition | Describe this pathological condition resulting from a previous disease, injury, therapy, or other trauma |
| Short | Specify sequelae |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 22. SOTT1Clinical.courseOfDisease.diseaseAdditionalInfo | |
| Definition | Additional information about the development of the disease over time |
| Short | More on course of disease |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 24. SOTT1Clinical.onSetType | |
| Definition | Was the onset of the disease unexpected and sudden? |
| Short | Onset: |
| Control | 0..1 |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 26. SOTT1Clinical.fever | |
| Definition | Subjective or self-reported fever or history of feeling feverish regardless of measured body temperature. |
| Short | History of fever |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 28. SOTT1Clinical.temperature | |
| Definition | Measured body temperature |
| Short | Temperature (degrees): |
| Control | 0..1 |
| Type | Quantity |
| 30. SOTT1Clinical.chills | |
| Definition | Subjective or self-reported fever or history of feeling feverish regardless of measured body temperature. |
| Short | Chills |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 32. SOTT1Clinical.sweat | |
| Definition | Sweating or Perspiration |
| Short | Profuse sweating |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 34. SOTT1Clinical.intensePain | |
| Definition | Indicate site(s) of intense pain: headaches (pain anywhere in the region of the head or neck), myalgia (abnormal pain in the muscles), arthralgia (abnormal pain in one or more joints), back pain, chest pain, general pain, other site |
| Short | Intense pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 36. SOTT1Clinical.headache | |
| Definition | Head pain (headache) |
| Short | Head pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 38. SOTT1Clinical.musclePain | |
| Definition | Muscular pain |
| Short | Muscular pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 40. SOTT1Clinical.chestPain | |
| Definition | Chest pain |
| Short | Chest pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 42. SOTT1Clinical.abdominalPain | |
| Definition | Stomach or abdominal pain or cramping, acute or chronic, localized or diffuse pain in the abdominal cavity. |
| Short | Abdominal pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 44. SOTT1Clinical.jointPain | |
| Definition | Joint pain |
| Short | Joint pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 46. SOTT1Clinical.otherSymptoms | |
| Definition | Other symptoms, specify: |
| Short | Other, specify |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 48. SOTT1Clinical.bleeding | |
| Definition | If bleeding reported or observed, indicate site of abnormal bleeding: gums, mouth, nose, vomit, stool, urine, vagina, at or from injection sites. |
| Short | Observed abnormal bleeding |
| Control | 0..1 |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 50. SOTT1Clinical.sunkenEyes | |
| Definition | Thrust, sukken eyes, skinfold |
| Short | Dehydration (thirst, sunken eyes/skin pinch) |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 52. SOTT1Clinical.shock | |
| Definition | Septic, haemorrhagic or cardiogenic shock |
| Short | Signs of shock |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 54. SOTT1Clinical.fatigue | |
| Definition | Intense fatigue, an abnormal state of drowsiness (lethargy or feeling lethargic), cannot conduct daily activity, lack of strengh |
| Short | Intense fatique or weakness |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 56. SOTT1Clinical.height | |
| Definition | Height (in meters/centimeters or in foot/inches) |
| Short | Height |
| Control | 0..1 |
| Type | Quantity |
| 58. SOTT1Clinical.weight | |
| Definition | Weight measured in kilograms |
| Short | Weight |
| Control | 0..1 |
| Type | Quantity |
| 60. SOTT1Clinical.otherSignsSymptoms | |
| Definition | Other signs, specify: |
| Short | Other signs and symptoms, specify |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 62. SOTT1Clinical.complains | |
| Definition | List complains |
| Short | Main complains expressed by the patient |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 64. SOTT1Clinical.cardiology | |
| Definition | Cardiology |
| Short | Cardiology |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalCardiology |
| 66. SOTT1Clinical.respiratory | |
| Definition | Respiratory |
| Short | Respiratory |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalRespiratory |
| 68. SOTT1Clinical.gastrointestinal | |
| Definition | Gastrointestinal |
| Short | Gastrointestinal |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalGastroIntestinal |
| 70. SOTT1Clinical.neurology | |
| Definition | Neurology |
| Short | Neurology |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalNeurology |
| 72. SOTT1Clinical.cutaneous | |
| Definition | Cutaneous |
| Short | Cutaneous |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalCutaneous |
| 74. SOTT1Clinical.ENT | |
| Definition | Ear Nose and Throat |
| Short | Ear Nose and Throat |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalENT |
| 76. SOTT1Clinical.urogynecology | |
| Definition | Urogynecology |
| Short | Urogynecology |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1Urogynecology |
| 78. SOTT1Clinical.comorbidity | |
| Definition | Comorbidity or underlying conditions |
| Short | Comorbidity or underlying conditions |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalComorbidity |
| 80. SOTT1Clinical.treatments | |
| Definition | Treatments |
| Short | Treatments |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalTreatments |
| 82. SOTT1Clinical.vaccination | |
| Definition | Vaccination |
| Short | Vaccination |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalVaccination |
Guidance on how to interpret the contents of this table can be found here
| 0. SOTT1Clinical | |
| Definition | Base definition for all elements that are defined inside a resource - but not those in a data type. |
| Short | Surveillance & Outbreak Toolkit T1 ClinicalBase for elements defined inside a resource |
| Control | 0..* This element is affected by the following invariants: ele-1 |
| Is Modifier | false |
| Logical Model | Instances of this logical model are not marked to be the target of a Reference |
| Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count())) |
| 2. SOTT1Clinical.modifierExtension | |
| Definition | May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself). |
| Short | Extensions that cannot be ignored even if unrecognized |
| Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
| Control | 0..* |
| Type | Extension |
| Is Modifier | true because Modifier extensions are expected to modify the meaning or interpretation of the element that contains them |
| Summary | true |
| Requirements | Modifier extensions allow for extensions that cannot be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the definition of modifier extensions. |
| Alternate Names | extensions, user content, modifiers |
| Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count())) ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists()) |
| 4. SOTT1Clinical.courseOfDisease | |
| Definition | Course of Disease |
| Short | Course of Disease |
| Control | 1..1 |
| Type | BackboneElement |
| Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count())) |
| 6. SOTT1Clinical.courseOfDisease.modifierExtension | |
| Definition | May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself). |
| Short | Extensions that cannot be ignored even if unrecognized |
| Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
| Control | 0..* |
| Type | Extension |
| Is Modifier | true because Modifier extensions are expected to modify the meaning or interpretation of the element that contains them |
| Summary | true |
| Requirements | Modifier extensions allow for extensions that cannot be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the definition of modifier extensions. |
| Alternate Names | extensions, user content, modifiers |
| Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count())) ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists()) |
| 8. SOTT1Clinical.courseOfDisease.symptomOnsetDate | |
| Definition | date of first appearance of the signs or symptoms of the illness/disease. |
| Short | date of onset of symptoms*:____/____/______ |
| Control | 1..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 10. SOTT1Clinical.courseOfDisease.presentedToHCFDate | |
| Definition | date the case first presentated to health facility. Caution: review potential duplicate data capturing with Section 1 before inclusion. |
| Short | For this episode, date first presented to health facility:___/___/_____ |
| Control | 0..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 12. SOTT1Clinical.courseOfDisease.admitted | |
| Definition | Was the case hospitalized, admitted to a hospital or other health facility as an inpatient? |
| Short | Currently admitted in health facility ?: |
| Control | 1..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 14. SOTT1Clinical.courseOfDisease.admittedHCFName | |
| Definition | If case admitted, name of the health facility where the case was admitted. |
| Short | name: |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 16. SOTT1Clinical.courseOfDisease.outcome | |
| Definition | Outcome of illness. Where possible, verify status after a suitable period of time [user defined] and update. |
| Short | Outcome of illness* (circle): |
| Control | 1..1 |
| Binding | The codes SHALL be taken from Patient Clinical Course Outcome |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 18. SOTT1Clinical.courseOfDisease.outcomeEvaluatedDate | |
| Definition | date if the case abandon, recover or died |
| Short | date outcome was evaluated:___/___/_____ |
| Control | 1..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 20. SOTT1Clinical.courseOfDisease.outcomeDate | |
| Definition | date if the case abandon, recover or died |
| Short | date* of recovery, default or death:___/___/_____ |
| Control | 1..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 22. SOTT1Clinical.courseOfDisease.sequelae | |
| Definition | Complications of disease. To be defined based on disease. Is there a pathological condition resulting from a previous disease, injury, therapy, or other trauma |
| Short | Sequelae after recovery |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 24. SOTT1Clinical.courseOfDisease.specifySequelae | |
| Definition | Describe this pathological condition resulting from a previous disease, injury, therapy, or other trauma |
| Short | Specify sequelae |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 26. SOTT1Clinical.courseOfDisease.diseaseAdditionalInfo | |
| Definition | Additional information about the development of the disease over time |
| Short | More on course of disease |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 28. SOTT1Clinical.onSetType | |
| Definition | Was the onset of the disease unexpected and sudden? |
| Short | Onset: |
| Control | 0..1 |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 30. SOTT1Clinical.fever | |
| Definition | Subjective or self-reported fever or history of feeling feverish regardless of measured body temperature. |
| Short | History of fever |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 32. SOTT1Clinical.temperature | |
| Definition | Measured body temperature |
| Short | Temperature (degrees): |
| Control | 0..1 |
| Type | Quantity |
| 34. SOTT1Clinical.chills | |
| Definition | Subjective or self-reported fever or history of feeling feverish regardless of measured body temperature. |
| Short | Chills |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 36. SOTT1Clinical.sweat | |
| Definition | Sweating or Perspiration |
| Short | Profuse sweating |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 38. SOTT1Clinical.intensePain | |
| Definition | Indicate site(s) of intense pain: headaches (pain anywhere in the region of the head or neck), myalgia (abnormal pain in the muscles), arthralgia (abnormal pain in one or more joints), back pain, chest pain, general pain, other site |
| Short | Intense pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 40. SOTT1Clinical.headache | |
| Definition | Head pain (headache) |
| Short | Head pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 42. SOTT1Clinical.musclePain | |
| Definition | Muscular pain |
| Short | Muscular pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 44. SOTT1Clinical.chestPain | |
| Definition | Chest pain |
| Short | Chest pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 46. SOTT1Clinical.abdominalPain | |
| Definition | Stomach or abdominal pain or cramping, acute or chronic, localized or diffuse pain in the abdominal cavity. |
| Short | Abdominal pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 48. SOTT1Clinical.jointPain | |
| Definition | Joint pain |
| Short | Joint pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 50. SOTT1Clinical.otherSymptoms | |
| Definition | Other symptoms, specify: |
| Short | Other, specify |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 52. SOTT1Clinical.bleeding | |
| Definition | If bleeding reported or observed, indicate site of abnormal bleeding: gums, mouth, nose, vomit, stool, urine, vagina, at or from injection sites. |
| Short | Observed abnormal bleeding |
| Control | 0..1 |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 54. SOTT1Clinical.sunkenEyes | |
| Definition | Thrust, sukken eyes, skinfold |
| Short | Dehydration (thirst, sunken eyes/skin pinch) |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 56. SOTT1Clinical.shock | |
| Definition | Septic, haemorrhagic or cardiogenic shock |
| Short | Signs of shock |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 58. SOTT1Clinical.fatigue | |
| Definition | Intense fatigue, an abnormal state of drowsiness (lethargy or feeling lethargic), cannot conduct daily activity, lack of strengh |
| Short | Intense fatique or weakness |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 60. SOTT1Clinical.height | |
| Definition | Height (in meters/centimeters or in foot/inches) |
| Short | Height |
| Control | 0..1 |
| Type | Quantity |
| 62. SOTT1Clinical.weight | |
| Definition | Weight measured in kilograms |
| Short | Weight |
| Control | 0..1 |
| Type | Quantity |
| 64. SOTT1Clinical.otherSignsSymptoms | |
| Definition | Other signs, specify: |
| Short | Other signs and symptoms, specify |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 66. SOTT1Clinical.complains | |
| Definition | List complains |
| Short | Main complains expressed by the patient |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 68. SOTT1Clinical.cardiology | |
| Definition | Cardiology |
| Short | Cardiology |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalCardiology |
| 70. SOTT1Clinical.respiratory | |
| Definition | Respiratory |
| Short | Respiratory |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalRespiratory |
| 72. SOTT1Clinical.gastrointestinal | |
| Definition | Gastrointestinal |
| Short | Gastrointestinal |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalGastroIntestinal |
| 74. SOTT1Clinical.neurology | |
| Definition | Neurology |
| Short | Neurology |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalNeurology |
| 76. SOTT1Clinical.cutaneous | |
| Definition | Cutaneous |
| Short | Cutaneous |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalCutaneous |
| 78. SOTT1Clinical.ENT | |
| Definition | Ear Nose and Throat |
| Short | Ear Nose and Throat |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalENT |
| 80. SOTT1Clinical.urogynecology | |
| Definition | Urogynecology |
| Short | Urogynecology |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1Urogynecology |
| 82. SOTT1Clinical.comorbidity | |
| Definition | Comorbidity or underlying conditions |
| Short | Comorbidity or underlying conditions |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalComorbidity |
| 84. SOTT1Clinical.treatments | |
| Definition | Treatments |
| Short | Treatments |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalTreatments |
| 86. SOTT1Clinical.vaccination | |
| Definition | Vaccination |
| Short | Vaccination |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalVaccination |
Guidance on how to interpret the contents of this table can be found here
| 0. SOTT1Clinical | |
| Definition | Base definition for all elements that are defined inside a resource - but not those in a data type. |
| Short | Surveillance & Outbreak Toolkit T1 Clinical |
| Control | 0..* This element is affected by the following invariants: ele-1 |
| Is Modifier | false |
| Logical Model | Instances of this logical model are not marked to be the target of a Reference |
| Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count())) |
| 2. SOTT1Clinical.id | |
| Definition | Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. |
| Short | Unique id for inter-element referencing |
| Control | 0..1 |
| Type | string |
| Is Modifier | false |
| XML Format | In the XML format, this property is represented as an attribute. |
| Summary | false |
| 4. SOTT1Clinical.extension | |
| Definition | May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
| Short | Additional content defined by implementations |
| Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
| Control | 0..* |
| Type | Extension |
| Is Modifier | false |
| Summary | false |
| Alternate Names | extensions, user content |
| Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))ext-1: Must have either extensions or value[x], not both ( extension.exists() != value.exists()) |
| Slicing | This element introduces a set of slices on SOTT1Clinical.extension. The slices are unordered and Open, and can be differentiated using the following discriminators: , and can be differentiated using the following discriminators: |
| 6. SOTT1Clinical.modifierExtension | |
| Definition | May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. |
| Short | Extensions that cannot be ignored even if unrecognized |
| Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
| Control | 0..* |
| Type | Extension |
| Is Modifier | true because Modifier extensions are expected to modify the meaning or interpretation of the element that contains them |
| Summary | true |
| Requirements | Modifier extensions allow for extensions that cannot be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the definition of modifier extensions. |
| Alternate Names | extensions, user content, modifiers |
| Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))ext-1: Must have either extensions or value[x], not both ( extension.exists() != value.exists()) |
| 8. SOTT1Clinical.courseOfDisease | |
| Definition | Course of Disease |
| Short | Course of Disease |
| Control | 1..1 |
| Type | BackboneElement |
| Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count())) |
| 10. SOTT1Clinical.courseOfDisease.id | |
| Definition | Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. |
| Short | Unique id for inter-element referencing |
| Control | 0..1 |
| Type | string |
| Is Modifier | false |
| XML Format | In the XML format, this property is represented as an attribute. |
| Summary | false |
| 12. SOTT1Clinical.courseOfDisease.extension | |
| Definition | May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
| Short | Additional content defined by implementations |
| Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
| Control | 0..* |
| Type | Extension |
| Is Modifier | false |
| Summary | false |
| Alternate Names | extensions, user content |
| Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))ext-1: Must have either extensions or value[x], not both ( extension.exists() != value.exists()) |
| Slicing | This element introduces a set of slices on SOTT1Clinical.courseOfDisease.extension. The slices are unordered and Open, and can be differentiated using the following discriminators: , and can be differentiated using the following discriminators: |
| 14. SOTT1Clinical.courseOfDisease.modifierExtension | |
| Definition | May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. |
| Short | Extensions that cannot be ignored even if unrecognized |
| Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
| Control | 0..* |
| Type | Extension |
| Is Modifier | true because Modifier extensions are expected to modify the meaning or interpretation of the element that contains them |
| Summary | true |
| Requirements | Modifier extensions allow for extensions that cannot be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the definition of modifier extensions. |
| Alternate Names | extensions, user content, modifiers |
| Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))ext-1: Must have either extensions or value[x], not both ( extension.exists() != value.exists()) |
| 16. SOTT1Clinical.courseOfDisease.symptomOnsetDate | |
| Definition | date of first appearance of the signs or symptoms of the illness/disease. |
| Short | date of onset of symptoms*:____/____/______ |
| Control | 1..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 18. SOTT1Clinical.courseOfDisease.presentedToHCFDate | |
| Definition | date the case first presentated to health facility. Caution: review potential duplicate data capturing with Section 1 before inclusion. |
| Short | For this episode, date first presented to health facility:___/___/_____ |
| Control | 0..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 20. SOTT1Clinical.courseOfDisease.admitted | |
| Definition | Was the case hospitalized, admitted to a hospital or other health facility as an inpatient? |
| Short | Currently admitted in health facility ?: |
| Control | 1..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 22. SOTT1Clinical.courseOfDisease.admittedHCFName | |
| Definition | If case admitted, name of the health facility where the case was admitted. |
| Short | name: |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 24. SOTT1Clinical.courseOfDisease.outcome | |
| Definition | Outcome of illness. Where possible, verify status after a suitable period of time [user defined] and update. |
| Short | Outcome of illness* (circle): |
| Control | 1..1 |
| Binding | The codes SHALL be taken from Patient Clinical Course Outcome |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 26. SOTT1Clinical.courseOfDisease.outcomeEvaluatedDate | |
| Definition | date if the case abandon, recover or died |
| Short | date outcome was evaluated:___/___/_____ |
| Control | 1..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 28. SOTT1Clinical.courseOfDisease.outcomeDate | |
| Definition | date if the case abandon, recover or died |
| Short | date* of recovery, default or death:___/___/_____ |
| Control | 1..1 |
| Type | date |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 30. SOTT1Clinical.courseOfDisease.sequelae | |
| Definition | Complications of disease. To be defined based on disease. Is there a pathological condition resulting from a previous disease, injury, therapy, or other trauma |
| Short | Sequelae after recovery |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 32. SOTT1Clinical.courseOfDisease.specifySequelae | |
| Definition | Describe this pathological condition resulting from a previous disease, injury, therapy, or other trauma |
| Short | Specify sequelae |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 34. SOTT1Clinical.courseOfDisease.diseaseAdditionalInfo | |
| Definition | Additional information about the development of the disease over time |
| Short | More on course of disease |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 36. SOTT1Clinical.onSetType | |
| Definition | Was the onset of the disease unexpected and sudden? |
| Short | Onset: |
| Control | 0..1 |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 38. SOTT1Clinical.fever | |
| Definition | Subjective or self-reported fever or history of feeling feverish regardless of measured body temperature. |
| Short | History of fever |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 40. SOTT1Clinical.temperature | |
| Definition | Measured body temperature |
| Short | Temperature (degrees): |
| Control | 0..1 |
| Type | Quantity |
| 42. SOTT1Clinical.chills | |
| Definition | Subjective or self-reported fever or history of feeling feverish regardless of measured body temperature. |
| Short | Chills |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 44. SOTT1Clinical.sweat | |
| Definition | Sweating or Perspiration |
| Short | Profuse sweating |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 46. SOTT1Clinical.intensePain | |
| Definition | Indicate site(s) of intense pain: headaches (pain anywhere in the region of the head or neck), myalgia (abnormal pain in the muscles), arthralgia (abnormal pain in one or more joints), back pain, chest pain, general pain, other site |
| Short | Intense pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 48. SOTT1Clinical.headache | |
| Definition | Head pain (headache) |
| Short | Head pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 50. SOTT1Clinical.musclePain | |
| Definition | Muscular pain |
| Short | Muscular pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 52. SOTT1Clinical.chestPain | |
| Definition | Chest pain |
| Short | Chest pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 54. SOTT1Clinical.abdominalPain | |
| Definition | Stomach or abdominal pain or cramping, acute or chronic, localized or diffuse pain in the abdominal cavity. |
| Short | Abdominal pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 56. SOTT1Clinical.jointPain | |
| Definition | Joint pain |
| Short | Joint pain |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 58. SOTT1Clinical.otherSymptoms | |
| Definition | Other symptoms, specify: |
| Short | Other, specify |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 60. SOTT1Clinical.bleeding | |
| Definition | If bleeding reported or observed, indicate site of abnormal bleeding: gums, mouth, nose, vomit, stool, urine, vagina, at or from injection sites. |
| Short | Observed abnormal bleeding |
| Control | 0..1 |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 62. SOTT1Clinical.sunkenEyes | |
| Definition | Thrust, sukken eyes, skinfold |
| Short | Dehydration (thirst, sunken eyes/skin pinch) |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 64. SOTT1Clinical.shock | |
| Definition | Septic, haemorrhagic or cardiogenic shock |
| Short | Signs of shock |
| Control | 0..1 |
| Binding | The codes SHALL be taken from Yes No Unknown |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 66. SOTT1Clinical.fatigue | |
| Definition | Intense fatigue, an abnormal state of drowsiness (lethargy or feeling lethargic), cannot conduct daily activity, lack of strengh |
| Short | Intense fatique or weakness |
| Control | 0..1 |
| Binding | The codes SHALL be taken from SOT Yes No |
| Type | code |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 68. SOTT1Clinical.height | |
| Definition | Height (in meters/centimeters or in foot/inches) |
| Short | Height |
| Control | 0..1 |
| Type | Quantity |
| 70. SOTT1Clinical.weight | |
| Definition | Weight measured in kilograms |
| Short | Weight |
| Control | 0..1 |
| Type | Quantity |
| 72. SOTT1Clinical.otherSignsSymptoms | |
| Definition | Other signs, specify: |
| Short | Other signs and symptoms, specify |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 74. SOTT1Clinical.complains | |
| Definition | List complains |
| Short | Main complains expressed by the patient |
| Control | 0..1 |
| Type | string |
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
| 76. SOTT1Clinical.cardiology | |
| Definition | Cardiology |
| Short | Cardiology |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalCardiology |
| 78. SOTT1Clinical.respiratory | |
| Definition | Respiratory |
| Short | Respiratory |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalRespiratory |
| 80. SOTT1Clinical.gastrointestinal | |
| Definition | Gastrointestinal |
| Short | Gastrointestinal |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalGastroIntestinal |
| 82. SOTT1Clinical.neurology | |
| Definition | Neurology |
| Short | Neurology |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalNeurology |
| 84. SOTT1Clinical.cutaneous | |
| Definition | Cutaneous |
| Short | Cutaneous |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalCutaneous |
| 86. SOTT1Clinical.ENT | |
| Definition | Ear Nose and Throat |
| Short | Ear Nose and Throat |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalENT |
| 88. SOTT1Clinical.urogynecology | |
| Definition | Urogynecology |
| Short | Urogynecology |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1Urogynecology |
| 90. SOTT1Clinical.comorbidity | |
| Definition | Comorbidity or underlying conditions |
| Short | Comorbidity or underlying conditions |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalComorbidity |
| 92. SOTT1Clinical.treatments | |
| Definition | Treatments |
| Short | Treatments |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalTreatments |
| 94. SOTT1Clinical.vaccination | |
| Definition | Vaccination |
| Short | Vaccination |
| Control | 0..1 |
| Type | http://worldhealthorganization.github.io/smart-ot/StructureDefinition/SOTT1ClinicalVaccination |