WHO SMART Guideline: Surveillance and Outbreak Toolkit, published by WHO. This is not an authorized publication; it is the continuous build for version 0.2.1. This version is based on the current content of https://github.com/WorldHealthOrganization/smart-ot and changes regularly. See the Directory of published versions

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: Specimen Collected - XML Representation

Draft as of 2023-11-07

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<CodeSystem xmlns="http://hl7.org/fhir">
  <id value="SpecimenCollectedCs"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p>This  code system <code>http://worldhealthorganization.github.io/smart-ot/SpecimenCollected</code> defines the following codes:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style="white-space:nowrap">NasalSwab<a name="SpecimenCollectedCs-NasalSwab"> </a></td><td>Nasal swab</td></tr><tr><td style="white-space:nowrap">ThroatSwab<a name="SpecimenCollectedCs-ThroatSwab"> </a></td><td>Throat swab</td></tr><tr><td style="white-space:nowrap">NasopharyngealSwab<a name="SpecimenCollectedCs-NasopharyngealSwab"> </a></td><td>Nasopharyngeal swab</td></tr><tr><td style="white-space:nowrap">NasalWash<a name="SpecimenCollectedCs-NasalWash"> </a></td><td>Nasal wash</td></tr><tr><td style="white-space:nowrap">Sputum<a name="SpecimenCollectedCs-Sputum"> </a></td><td>Sputum</td></tr><tr><td style="white-space:nowrap">NasopharyngealSspirate<a name="SpecimenCollectedCs-NasopharyngealSspirate"> </a></td><td>Nasopharyngeal aspirate</td></tr><tr><td style="white-space:nowrap">TrachealAspirate<a name="SpecimenCollectedCs-TrachealAspirate"> </a></td><td>Tracheal aspirate</td></tr><tr><td style="white-space:nowrap">BronchoalveolarLavage<a name="SpecimenCollectedCs-BronchoalveolarLavage"> </a></td><td>Bronchoalveolar lavage</td></tr><tr><td style="white-space:nowrap">TissueBiopsy<a name="SpecimenCollectedCs-TissueBiopsy"> </a></td><td>Tissue biopsy</td></tr><tr><td style="white-space:nowrap">SerumFirst<a name="SpecimenCollectedCs-SerumFirst"> </a></td><td>Serum (first sample)</td></tr><tr><td style="white-space:nowrap">SerumSecond<a name="SpecimenCollectedCs-SerumSecond"> </a></td><td>Serum (second sample)</td></tr><tr><td style="white-space:nowrap">WholeBlood<a name="SpecimenCollectedCs-WholeBlood"> </a></td><td>Whole blood</td></tr><tr><td style="white-space:nowrap">Urine<a name="SpecimenCollectedCs-Urine"> </a></td><td>Urine</td></tr><tr><td style="white-space:nowrap">Other<a name="SpecimenCollectedCs-Other"> </a></td><td>Other</td></tr></table></div>
  </text>
  <url
       value="http://worldhealthorganization.github.io/smart-ot/SpecimenCollected"/>
  <version value="0.2.1"/>
  <name value="SpecimenCollectedCs"/>
  <title value="Specimen Collected"/>
  <status value="draft"/>
  <date value="2023-11-07T05:59:29+00:00"/>
  <publisher value="WHO"/>
  <contact>
    <name value="WHO"/>
    <telecom>
      <system value="url"/>
      <value value="http://who.int"/>
    </telecom>
  </contact>
  <description value="Specimen Collected"/>
  <jurisdiction>
    <coding>
      <system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/>
      <code value="001"/>
    </coding>
  </jurisdiction>
  <content value="complete"/>
  <count value="14"/>
  <concept>
    <code value="NasalSwab"/>
    <display value="Nasal swab"/>
  </concept>
  <concept>
    <code value="ThroatSwab"/>
    <display value="Throat swab"/>
  </concept>
  <concept>
    <code value="NasopharyngealSwab"/>
    <display value="Nasopharyngeal swab"/>
  </concept>
  <concept>
    <code value="NasalWash"/>
    <display value="Nasal wash"/>
  </concept>
  <concept>
    <code value="Sputum"/>
    <display value="Sputum"/>
  </concept>
  <concept>
    <code value="NasopharyngealSspirate"/>
    <display value="Nasopharyngeal aspirate"/>
  </concept>
  <concept>
    <code value="TrachealAspirate"/>
    <display value="Tracheal aspirate"/>
  </concept>
  <concept>
    <code value="BronchoalveolarLavage"/>
    <display value="Bronchoalveolar lavage"/>
  </concept>
  <concept>
    <code value="TissueBiopsy"/>
    <display value="Tissue biopsy"/>
  </concept>
  <concept>
    <code value="SerumFirst"/>
    <display value="Serum (first sample)"/>
  </concept>
  <concept>
    <code value="SerumSecond"/>
    <display value="Serum (second sample)"/>
  </concept>
  <concept>
    <code value="WholeBlood"/>
    <display value="Whole blood"/>
  </concept>
  <concept>
    <code value="Urine"/>
    <display value="Urine"/>
  </concept>
  <concept>
    <code value="Other"/>
    <display value="Other"/>
  </concept>
</CodeSystem>