WHO SMART Guideline: Surveillance and Outbreak Toolkit, published by WHO. This is not an authorized publication; it is the continuous build for version 0.2.1. This version is based on the current content of https://github.com/WorldHealthOrganization/smart-ot and changes regularly. See the Directory of published versions

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: PAHO MRCIF CodeSystem for Data Elements - XML Representation

Draft as of 2023-11-07

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<CodeSystem xmlns="http://hl7.org/fhir">
  <id value="PAHO-MRCIF"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p>This case-insensitive code system <code>http://worldhealthorganization.github.io/smart-ot/CodeSystem/PAHO-MRCIF</code> defines the following codes:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style="white-space:nowrap">DE1<a name="PAHO-MRCIF-DE1"> </a></td><td>Initial diagnosis</td></tr><tr><td style="white-space:nowrap">DE8<a name="PAHO-MRCIF-DE8"> </a></td><td>Case ID</td></tr><tr><td style="white-space:nowrap">DE9<a name="PAHO-MRCIF-DE9"> </a></td><td>Reporting facility</td></tr><tr><td style="white-space:nowrap">DE10<a name="PAHO-MRCIF-DE10"> </a></td><td>Telephone</td></tr><tr><td style="white-space:nowrap">DE11<a name="PAHO-MRCIF-DE11"> </a></td><td>Country</td></tr><tr><td style="white-space:nowrap">DE12<a name="PAHO-MRCIF-DE12"> </a></td><td>Municipality</td></tr><tr><td style="white-space:nowrap">DE13<a name="PAHO-MRCIF-DE13"> </a></td><td>State</td></tr><tr><td style="white-space:nowrap">DE14<a name="PAHO-MRCIF-DE14"> </a></td><td>Locality</td></tr><tr><td style="white-space:nowrap">DE15<a name="PAHO-MRCIF-DE15"> </a></td><td>Reported by</td></tr><tr><td style="white-space:nowrap">DE16<a name="PAHO-MRCIF-DE16"> </a></td><td>Date of consultation</td></tr><tr><td style="white-space:nowrap">DE17<a name="PAHO-MRCIF-DE17"> </a></td><td>Date of home visit</td></tr><tr><td style="white-space:nowrap">DE18<a name="PAHO-MRCIF-DE18"> </a></td><td>Date reported local</td></tr><tr><td style="white-space:nowrap">DE19<a name="PAHO-MRCIF-DE19"> </a></td><td>Date reported national</td></tr><tr><td style="white-space:nowrap">DE20<a name="PAHO-MRCIF-DE20"> </a></td><td>Detected by</td></tr><tr><td style="white-space:nowrap">DE29<a name="PAHO-MRCIF-DE29"> </a></td><td>Type of provider reporting</td></tr><tr><td style="white-space:nowrap">DE33<a name="PAHO-MRCIF-DE33"> </a></td><td>Specify</td></tr><tr><td style="white-space:nowrap">DE34<a name="PAHO-MRCIF-DE34"> </a></td><td>Name</td></tr><tr><td style="white-space:nowrap">DE35<a name="PAHO-MRCIF-DE35"> </a></td><td>Guardian</td></tr><tr><td style="white-space:nowrap">DE36<a name="PAHO-MRCIF-DE36"> </a></td><td>Address</td></tr><tr><td style="white-space:nowrap">DE37<a name="PAHO-MRCIF-DE37"> </a></td><td>Telephone</td></tr><tr><td style="white-space:nowrap">DE38<a name="PAHO-MRCIF-DE38"> </a></td><td>Landmark</td></tr><tr><td style="white-space:nowrap">DE39<a name="PAHO-MRCIF-DE39"> </a></td><td>Occupation</td></tr><tr><td style="white-space:nowrap">DE40<a name="PAHO-MRCIF-DE40"> </a></td><td>Locality type</td></tr><tr><td style="white-space:nowrap">DE44<a name="PAHO-MRCIF-DE44"> </a></td><td>Work address</td></tr><tr><td style="white-space:nowrap">DE45<a name="PAHO-MRCIF-DE45"> </a></td><td>Sex</td></tr><tr><td style="white-space:nowrap">DE48<a name="PAHO-MRCIF-DE48"> </a></td><td>Date of birth</td></tr><tr><td style="white-space:nowrap">DE49<a name="PAHO-MRCIF-DE49"> </a></td><td>Age onset</td></tr><tr><td style="white-space:nowrap">DE50<a name="PAHO-MRCIF-DE50"> </a></td><td>Vaccine type</td></tr><tr><td style="white-space:nowrap">DE55<a name="PAHO-MRCIF-DE55"> </a></td><td>No of doses</td></tr><tr><td style="white-space:nowrap">DE61<a name="PAHO-MRCIF-DE61"> </a></td><td>Last dose date</td></tr><tr><td style="white-space:nowrap">DE62<a name="PAHO-MRCIF-DE62"> </a></td><td>Source of information</td></tr><tr><td style="white-space:nowrap">DE66<a name="PAHO-MRCIF-DE66"> </a></td><td>Fever</td></tr><tr><td style="white-space:nowrap">DE70<a name="PAHO-MRCIF-DE70"> </a></td><td>Temperature</td></tr><tr><td style="white-space:nowrap">DE71<a name="PAHO-MRCIF-DE71"> </a></td><td>Date of fever onset</td></tr><tr><td style="white-space:nowrap">DE72<a name="PAHO-MRCIF-DE72"> </a></td><td>Rash</td></tr><tr><td style="white-space:nowrap">DE76<a name="PAHO-MRCIF-DE76"> </a></td><td>Rash duration</td></tr><tr><td style="white-space:nowrap">DE77<a name="PAHO-MRCIF-DE77"> </a></td><td>Rash onset date</td></tr><tr><td style="white-space:nowrap">DE78<a name="PAHO-MRCIF-DE78"> </a></td><td>Rash type</td></tr><tr><td style="white-space:nowrap">DE84<a name="PAHO-MRCIF-DE84"> </a></td><td>Cough</td></tr><tr><td style="white-space:nowrap">DE88<a name="PAHO-MRCIF-DE88"> </a></td><td>Conjunctivitis</td></tr><tr><td style="white-space:nowrap">DE92<a name="PAHO-MRCIF-DE92"> </a></td><td>Coryza</td></tr><tr><td style="white-space:nowrap">DE96<a name="PAHO-MRCIF-DE96"> </a></td><td>Koplik spots</td></tr><tr><td style="white-space:nowrap">DE100<a name="PAHO-MRCIF-DE100"> </a></td><td>Lymphadenopathy</td></tr><tr><td style="white-space:nowrap">DE104<a name="PAHO-MRCIF-DE104"> </a></td><td>Jointpain</td></tr><tr><td style="white-space:nowrap">DE108<a name="PAHO-MRCIF-DE108"> </a></td><td>Pregnancy</td></tr><tr><td style="white-space:nowrap">DE112<a name="PAHO-MRCIF-DE112"> </a></td><td>Months pregnant</td></tr><tr><td style="white-space:nowrap">DE113<a name="PAHO-MRCIF-DE113"> </a></td><td>Place of birth</td></tr><tr><td style="white-space:nowrap">DE114<a name="PAHO-MRCIF-DE114"> </a></td><td>Admitted</td></tr><tr><td style="white-space:nowrap">DE118<a name="PAHO-MRCIF-DE118"> </a></td><td>Admitted HCF name</td></tr><tr><td style="white-space:nowrap">DE119<a name="PAHO-MRCIF-DE119"> </a></td><td>Admission date</td></tr><tr><td style="white-space:nowrap">DE120<a name="PAHO-MRCIF-DE120"> </a></td><td>Hospital record number</td></tr><tr><td style="white-space:nowrap">DE121<a name="PAHO-MRCIF-DE121"> </a></td><td>Outcome</td></tr><tr><td style="white-space:nowrap">DE127<a name="PAHO-MRCIF-DE127"> </a></td><td>Outcome date</td></tr><tr><td style="white-space:nowrap">DE128<a name="PAHO-MRCIF-DE128"> </a></td><td>Primary cause of death</td></tr><tr><td style="white-space:nowrap">DE129<a name="PAHO-MRCIF-DE129"> </a></td><td>Disease additional info</td></tr><tr><td style="white-space:nowrap">DE130<a name="PAHO-MRCIF-DE130"> </a></td><td>Specimen number</td></tr><tr><td style="white-space:nowrap">DE134<a name="PAHO-MRCIF-DE134"> </a></td><td>Sample type</td></tr><tr><td style="white-space:nowrap">DE141<a name="PAHO-MRCIF-DE141"> </a></td><td>Collection date</td></tr><tr><td style="white-space:nowrap">DE142<a name="PAHO-MRCIF-DE142"> </a></td><td>Lab name</td></tr><tr><td style="white-space:nowrap">DE143<a name="PAHO-MRCIF-DE143"> </a></td><td>Specimen sent date</td></tr><tr><td style="white-space:nowrap">DE144<a name="PAHO-MRCIF-DE144"> </a></td><td>Specimen received date</td></tr><tr><td style="white-space:nowrap">DE145<a name="PAHO-MRCIF-DE145"> </a></td><td>Sample id</td></tr><tr><td style="white-space:nowrap">DE146<a name="PAHO-MRCIF-DE146"> </a></td><td>Test performed</td></tr><tr><td style="white-space:nowrap">DE155<a name="PAHO-MRCIF-DE155"> </a></td><td>Antigen</td></tr><tr><td style="white-space:nowrap">DE163<a name="PAHO-MRCIF-DE163"> </a></td><td>Result</td></tr><tr><td style="white-space:nowrap">DE167<a name="PAHO-MRCIF-DE167"> </a></td><td>Result date</td></tr><tr><td style="white-space:nowrap">DE168<a name="PAHO-MRCIF-DE168"> </a></td><td>Specify virus</td></tr><tr><td style="white-space:nowrap">DE169<a name="PAHO-MRCIF-DE169"> </a></td><td>Case search conducted</td></tr><tr><td style="white-space:nowrap">DE173<a name="PAHO-MRCIF-DE173"> </a></td><td>No of suspect cases</td></tr><tr><td style="white-space:nowrap">DE174<a name="PAHO-MRCIF-DE174"> </a></td><td>Pregnant contact</td></tr><tr><td style="white-space:nowrap">DE178<a name="PAHO-MRCIF-DE178"> </a></td><td>Pregnant contact names</td></tr><tr><td style="white-space:nowrap">DE179<a name="PAHO-MRCIF-DE179"> </a></td><td>Local cases present</td></tr><tr><td style="white-space:nowrap">DE185<a name="PAHO-MRCIF-DE185"> </a></td><td>Travelled outside</td></tr><tr><td style="white-space:nowrap">DE189<a name="PAHO-MRCIF-DE189"> </a></td><td>Place of travel</td></tr><tr><td style="white-space:nowrap">DE190<a name="PAHO-MRCIF-DE190"> </a></td><td>Arrival date</td></tr><tr><td style="white-space:nowrap">DE191<a name="PAHO-MRCIF-DE191"> </a></td><td>Departure date</td></tr><tr><td style="white-space:nowrap">DE192<a name="PAHO-MRCIF-DE192"> </a></td><td>Infection setting</td></tr><tr><td style="white-space:nowrap">DE198<a name="PAHO-MRCIF-DE198"> </a></td><td>Specify infection setting</td></tr><tr><td style="white-space:nowrap">DE199<a name="PAHO-MRCIF-DE199"> </a></td><td>Ring vaccination</td></tr><tr><td style="white-space:nowrap">DE203<a name="PAHO-MRCIF-DE203"> </a></td><td>Date started</td></tr><tr><td style="white-space:nowrap">DE204<a name="PAHO-MRCIF-DE204"> </a></td><td>Date ended</td></tr><tr><td style="white-space:nowrap">DE205<a name="PAHO-MRCIF-DE205"> </a></td><td>No of doses ring vaccination</td></tr><tr><td style="white-space:nowrap">DE206<a name="PAHO-MRCIF-DE206"> </a></td><td>Rapid coverage monitoring</td></tr><tr><td style="white-space:nowrap">DE210<a name="PAHO-MRCIF-DE210"> </a></td><td>Percent vaccinated</td></tr><tr><td style="white-space:nowrap">DE211<a name="PAHO-MRCIF-DE211"> </a></td><td>Contact tracing done</td></tr><tr><td style="white-space:nowrap">DE215<a name="PAHO-MRCIF-DE215"> </a></td><td>Last follow up</td></tr><tr><td style="white-space:nowrap">DE216<a name="PAHO-MRCIF-DE216"> </a></td><td>Final classification</td></tr><tr><td style="white-space:nowrap">DE220<a name="PAHO-MRCIF-DE220"> </a></td><td>Confirmation basis</td></tr><tr><td style="white-space:nowrap">DE224<a name="PAHO-MRCIF-DE224"> </a></td><td>Country importation</td></tr><tr><td style="white-space:nowrap">DE225<a name="PAHO-MRCIF-DE225"> </a></td><td>Discarding basis</td></tr><tr><td style="white-space:nowrap">DE233<a name="PAHO-MRCIF-DE233"> </a></td><td>Source of infection</td></tr><tr><td style="white-space:nowrap">DE238<a name="PAHO-MRCIF-DE238"> </a></td><td>Contact</td></tr><tr><td style="white-space:nowrap">DE242<a name="PAHO-MRCIF-DE242"> </a></td><td>Contact case no</td></tr><tr><td style="white-space:nowrap">DE243<a name="PAHO-MRCIF-DE243"> </a></td><td>Classified by</td></tr><tr><td style="white-space:nowrap">DE244<a name="PAHO-MRCIF-DE244"> </a></td><td>Classification date</td></tr></table></div>
  </text>
  <url
       value="http://worldhealthorganization.github.io/smart-ot/CodeSystem/PAHO-MRCIF"/>
  <version value="0.2.1"/>
  <name value="PAHO_MRCIF"/>
  <title value="PAHO MRCIF CodeSystem for Data Elements"/>
  <status value="draft"/>
  <experimental value="false"/>
  <date value="2023-11-07T05:59:29+00:00"/>
  <publisher value="WHO"/>
  <contact>
    <name value="WHO"/>
    <telecom>
      <system value="url"/>
      <value value="http://who.int"/>
    </telecom>
  </contact>
  <description value="CodeSystem for PAHO MRCIF Data Elements"/>
  <jurisdiction>
    <coding>
      <system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/>
      <code value="001"/>
    </coding>
  </jurisdiction>
  <caseSensitive value="false"/>
  <content value="complete"/>
  <count value="95"/>
  <concept>
    <code value="DE1"/>
    <display value="Initial diagnosis"/>
  </concept>
  <concept>
    <code value="DE8"/>
    <display value="Case ID"/>
  </concept>
  <concept>
    <code value="DE9"/>
    <display value="Reporting facility"/>
  </concept>
  <concept>
    <code value="DE10"/>
    <display value="Telephone"/>
  </concept>
  <concept>
    <code value="DE11"/>
    <display value="Country"/>
  </concept>
  <concept>
    <code value="DE12"/>
    <display value="Municipality"/>
  </concept>
  <concept>
    <code value="DE13"/>
    <display value="State"/>
  </concept>
  <concept>
    <code value="DE14"/>
    <display value="Locality"/>
  </concept>
  <concept>
    <code value="DE15"/>
    <display value="Reported by"/>
  </concept>
  <concept>
    <code value="DE16"/>
    <display value="Date of consultation"/>
  </concept>
  <concept>
    <code value="DE17"/>
    <display value="Date of home visit"/>
  </concept>
  <concept>
    <code value="DE18"/>
    <display value="Date reported local"/>
  </concept>
  <concept>
    <code value="DE19"/>
    <display value="Date reported national"/>
  </concept>
  <concept>
    <code value="DE20"/>
    <display value="Detected by"/>
  </concept>
  <concept>
    <code value="DE29"/>
    <display value="Type of provider reporting"/>
  </concept>
  <concept>
    <code value="DE33"/>
    <display value="Specify"/>
  </concept>
  <concept>
    <code value="DE34"/>
    <display value="Name"/>
  </concept>
  <concept>
    <code value="DE35"/>
    <display value="Guardian"/>
  </concept>
  <concept>
    <code value="DE36"/>
    <display value="Address"/>
  </concept>
  <concept>
    <code value="DE37"/>
    <display value="Telephone"/>
  </concept>
  <concept>
    <code value="DE38"/>
    <display value="Landmark"/>
  </concept>
  <concept>
    <code value="DE39"/>
    <display value="Occupation"/>
  </concept>
  <concept>
    <code value="DE40"/>
    <display value="Locality type"/>
  </concept>
  <concept>
    <code value="DE44"/>
    <display value="Work address"/>
  </concept>
  <concept>
    <code value="DE45"/>
    <display value="Sex"/>
  </concept>
  <concept>
    <code value="DE48"/>
    <display value="Date of birth"/>
  </concept>
  <concept>
    <code value="DE49"/>
    <display value="Age onset"/>
  </concept>
  <concept>
    <code value="DE50"/>
    <display value="Vaccine type"/>
  </concept>
  <concept>
    <code value="DE55"/>
    <display value="No of doses"/>
  </concept>
  <concept>
    <code value="DE61"/>
    <display value="Last dose date"/>
  </concept>
  <concept>
    <code value="DE62"/>
    <display value="Source of information"/>
  </concept>
  <concept>
    <code value="DE66"/>
    <display value="Fever"/>
  </concept>
  <concept>
    <code value="DE70"/>
    <display value="Temperature"/>
  </concept>
  <concept>
    <code value="DE71"/>
    <display value="Date of fever onset"/>
  </concept>
  <concept>
    <code value="DE72"/>
    <display value="Rash"/>
  </concept>
  <concept>
    <code value="DE76"/>
    <display value="Rash duration"/>
  </concept>
  <concept>
    <code value="DE77"/>
    <display value="Rash onset date"/>
  </concept>
  <concept>
    <code value="DE78"/>
    <display value="Rash type"/>
  </concept>
  <concept>
    <code value="DE84"/>
    <display value="Cough"/>
  </concept>
  <concept>
    <code value="DE88"/>
    <display value="Conjunctivitis"/>
  </concept>
  <concept>
    <code value="DE92"/>
    <display value="Coryza"/>
  </concept>
  <concept>
    <code value="DE96"/>
    <display value="Koplik spots"/>
  </concept>
  <concept>
    <code value="DE100"/>
    <display value="Lymphadenopathy"/>
  </concept>
  <concept>
    <code value="DE104"/>
    <display value="Jointpain"/>
  </concept>
  <concept>
    <code value="DE108"/>
    <display value="Pregnancy"/>
  </concept>
  <concept>
    <code value="DE112"/>
    <display value="Months pregnant"/>
  </concept>
  <concept>
    <code value="DE113"/>
    <display value="Place of birth"/>
  </concept>
  <concept>
    <code value="DE114"/>
    <display value="Admitted"/>
  </concept>
  <concept>
    <code value="DE118"/>
    <display value="Admitted HCF name"/>
  </concept>
  <concept>
    <code value="DE119"/>
    <display value="Admission date"/>
  </concept>
  <concept>
    <code value="DE120"/>
    <display value="Hospital record number"/>
  </concept>
  <concept>
    <code value="DE121"/>
    <display value="Outcome"/>
  </concept>
  <concept>
    <code value="DE127"/>
    <display value="Outcome date"/>
  </concept>
  <concept>
    <code value="DE128"/>
    <display value="Primary cause of death"/>
  </concept>
  <concept>
    <code value="DE129"/>
    <display value="Disease additional info"/>
  </concept>
  <concept>
    <code value="DE130"/>
    <display value="Specimen number"/>
  </concept>
  <concept>
    <code value="DE134"/>
    <display value="Sample type"/>
  </concept>
  <concept>
    <code value="DE141"/>
    <display value="Collection date"/>
  </concept>
  <concept>
    <code value="DE142"/>
    <display value="Lab name"/>
  </concept>
  <concept>
    <code value="DE143"/>
    <display value="Specimen sent date"/>
  </concept>
  <concept>
    <code value="DE144"/>
    <display value="Specimen received date"/>
  </concept>
  <concept>
    <code value="DE145"/>
    <display value="Sample id"/>
  </concept>
  <concept>
    <code value="DE146"/>
    <display value="Test performed"/>
  </concept>
  <concept>
    <code value="DE155"/>
    <display value="Antigen"/>
  </concept>
  <concept>
    <code value="DE163"/>
    <display value="Result"/>
  </concept>
  <concept>
    <code value="DE167"/>
    <display value="Result date"/>
  </concept>
  <concept>
    <code value="DE168"/>
    <display value="Specify virus"/>
  </concept>
  <concept>
    <code value="DE169"/>
    <display value="Case search conducted"/>
  </concept>
  <concept>
    <code value="DE173"/>
    <display value="No of suspect cases"/>
  </concept>
  <concept>
    <code value="DE174"/>
    <display value="Pregnant contact"/>
  </concept>
  <concept>
    <code value="DE178"/>
    <display value="Pregnant contact names"/>
  </concept>
  <concept>
    <code value="DE179"/>
    <display value="Local cases present"/>
  </concept>
  <concept>
    <code value="DE185"/>
    <display value="Travelled outside"/>
  </concept>
  <concept>
    <code value="DE189"/>
    <display value="Place of travel"/>
  </concept>
  <concept>
    <code value="DE190"/>
    <display value="Arrival date"/>
  </concept>
  <concept>
    <code value="DE191"/>
    <display value="Departure date"/>
  </concept>
  <concept>
    <code value="DE192"/>
    <display value="Infection setting"/>
  </concept>
  <concept>
    <code value="DE198"/>
    <display value="Specify infection setting"/>
  </concept>
  <concept>
    <code value="DE199"/>
    <display value="Ring vaccination"/>
  </concept>
  <concept>
    <code value="DE203"/>
    <display value="Date started"/>
  </concept>
  <concept>
    <code value="DE204"/>
    <display value="Date ended"/>
  </concept>
  <concept>
    <code value="DE205"/>
    <display value="No of doses ring vaccination"/>
  </concept>
  <concept>
    <code value="DE206"/>
    <display value="Rapid coverage monitoring"/>
  </concept>
  <concept>
    <code value="DE210"/>
    <display value="Percent vaccinated"/>
  </concept>
  <concept>
    <code value="DE211"/>
    <display value="Contact tracing done"/>
  </concept>
  <concept>
    <code value="DE215"/>
    <display value="Last follow up"/>
  </concept>
  <concept>
    <code value="DE216"/>
    <display value="Final classification"/>
  </concept>
  <concept>
    <code value="DE220"/>
    <display value="Confirmation basis"/>
  </concept>
  <concept>
    <code value="DE224"/>
    <display value="Country importation"/>
  </concept>
  <concept>
    <code value="DE225"/>
    <display value="Discarding basis"/>
  </concept>
  <concept>
    <code value="DE233"/>
    <display value="Source of infection"/>
  </concept>
  <concept>
    <code value="DE238"/>
    <display value="Contact"/>
  </concept>
  <concept>
    <code value="DE242"/>
    <display value="Contact case no"/>
  </concept>
  <concept>
    <code value="DE243"/>
    <display value="Classified by"/>
  </concept>
  <concept>
    <code value="DE244"/>
    <display value="Classification date"/>
  </concept>
</CodeSystem>