WHO SMART Guideline: Surveillance and Outbreak Toolkit
0.2.1 - CI Build International flag

WHO SMART Guideline: Surveillance and Outbreak Toolkit, published by WHO. This is not an authorized publication; it is the continuous build for version 0.2.1. This version is based on the current content of https://github.com/WorldHealthOrganization/smart-ot and changes regularly. See the Directory of published versions

ValueSet: Pathogen Tested

Official URL: http://worldhealthorganization.github.io/smart-ot/ValueSet/PathogenTested Version: 0.2.1
Draft as of 2023-11-07 Computable Name: PathogenTested

Pathogen Tested

References

Logical Definition (CLD)

 

Expansion

This value set contains 16 concepts

Expansion based on codesystem Pathogen Tested v0.2.1 (CodeSystem)

CodeSystemDisplay
  InfluenzaA/Bhttp://worldhealthorganization.github.io/smart-ot/PathogenTestedInfluenza A/B
  InfluenzaSubtypinghttp://worldhealthorganization.github.io/smart-ot/PathogenTestedInfluenza subtyping
  MERSCVhttp://worldhealthorganization.github.io/smart-ot/PathogenTestedMERS-CV
  SARShttp://worldhealthorganization.github.io/smart-ot/PathogenTestedSARS
  Rsvhttp://worldhealthorganization.github.io/smart-ot/PathogenTestedRsv
  HumanMetapneumovirushttp://worldhealthorganization.github.io/smart-ot/PathogenTestedHuman metapneumovirus
  Parainfluenza123http://worldhealthorganization.github.io/smart-ot/PathogenTestedParainfluenza (1,2,3)
  Adenovirushttp://worldhealthorganization.github.io/smart-ot/PathogenTestedAdenovirus
  Rhinvoirushttp://worldhealthorganization.github.io/smart-ot/PathogenTestedRhinvoirus
  Enterovirushttp://worldhealthorganization.github.io/smart-ot/PathogenTestedEnterovirus
  Coronavirushttp://worldhealthorganization.github.io/smart-ot/PathogenTestedCoronavirus
  ChlamydiaPneumoniahttp://worldhealthorganization.github.io/smart-ot/PathogenTestedChlamydia pneumonia
  MycoplasmaPneumoniahttp://worldhealthorganization.github.io/smart-ot/PathogenTestedMycoplasma pneumonia
  Legionellahttp://worldhealthorganization.github.io/smart-ot/PathogenTestedLegionella
  StreptococcusPneumoniahttp://worldhealthorganization.github.io/smart-ot/PathogenTestedStreptococcus pneumonia
  Otherhttp://worldhealthorganization.github.io/smart-ot/PathogenTestedOther

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code