Reduction of L. monocytogenes due to smoking brined or dry-salted fish
Source:R/sfSmoking.R
sfSmoking.Rd
The function sfSmoking()
describes the combined effect of smoking brined or salted fish fillets and maturing
for 18-24 hours. Based on the literature, different reduction factors of L. monocytogenes are applied to
brine-injected fish fillets and dry-salted fillets. Lot-specific log10 reduction values are sampled from normal
distributions, attending to the type of salting.
Usage
sfSmoking(
data = list(),
saltingType = NULL,
nLots = NULL,
sizeLot = NULL,
rBrineMean = 0.871,
rBrineSd = 0.807,
rDrysaltMean = 1.093,
rDrysaltSd = 0.532
)
Arguments
- data
See
Lot2LotGen()
function.- saltingType
Salting method employed in each of the lots:
brined
orsalted
(vector).- nLots
Number of lots sampled or size of the Monte Carlo simulation (scalar).
- sizeLot
Number of units or portions produced in a lot (scalar).
- rBrineMean
(
log10
) mean of the normal distribution about the log10 reduction in L. monocytogenes in brine-injected fish fillets due to smoking and 18-24-h maturation (scalar).- rBrineSd
(
log10
) standard deviation of the normal distribution about the log10 reduction in L. monocytogenes in brine-injected fish fillets due to smoking and 18-24-h maturation (scalar).- rDrysaltMean
(
log10
) mean of the normal distribution about the log10 reduction in L. monocytogenes in dry-salted fish fillets due to smoking and 18-24-h maturation (scalar).- rDrysaltSd
(
log10
) standard deviation of the normal distribution about the log10 reduction in L. monocytogenes in dry-salted fish fillets due to smoking and 18-24-h maturation (scalar).
Value
A list of two elements:
- N
(CFU) A matrix of size nLots lots by sizeLot units containing the numbers of L. monocytogenes in salted fish fillets after smoking and 18-24-h maturation
- pSurvSmoking
Probability of a microbial cell to survive the smoking treatment (vector).
Note
The suggested parameters rBrineMean=0.871
and rBrineSd=0.807
defining the normal distribution about the
variability in the log10 reduction in L. monocytogenes in brined-injected fish were modelled using data extracted from
Eklund et al. (1995)
and Porsby et al. (2008)
; where these authors inoculated L. monocytogenes
in smoked salmon through brine injection; submitted samples to cycles of cold-smoking between 6-8 hours; and determined the microbial
concentrations after 18-24 hours maturation. The suggested parameters rDrysaltMean=1.093
and rDrysaltSd=0.532
characterising
the normal distribution about the variability in the log10 reduction in L. monocytogenes in dry-salted fish were modelled using data from
Eklund et al. (1995)
, Neunlist et al. (2005)
and Porsby et al. (2008)
, who performed
experiments inoculating inoculated L. monocytogenes on the surface of dry-salted salmon, and quantified the pathogen concentrations after
18-24 hours maturation.
References
Eklund MW, Poysky FT, Paranjpye RN, Lashbrook LC, Peterson ME, Pelroy GA (1995). “Incidence and Sources of Listeria monocytogenes in Cold-Smoked Fishery Products and Processing Plants.” Journal of food protection, 58, 502-508. Wolodzko T (2020). extraDistr: Additional Univariate and Multivariate Distributions. R package version 1.9.1, https://CRAN.R-project.org/package=extraDistr. Neunlist MR, Ralazamahaleo M, Cappelier J, Besnard V, Federighi M, Leroi F (2005). “Effect of salting and cold-smoking process on the culturability, viability, and virulence of Listeria monocytogenes strain Scott A.” Journal of food protection, 68, 85-91. Porsby CH, Vogel BF, Mohr M, Gram L (2008). “Influence of processing steps in cold-smoked salmon production on survival and growth of persistent and presumed non-persistent Listeria monocytogenes.” International Journal of Food Microbiology, 122(3), 287-295. doi:10.1016/j.ijfoodmicro.2008.01.010 . Team RC (2022). R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. https://www.R-project.org/.
Author
Ursula Gonzales-Barron ubarron@ipb.pt
Examples
dat <- Lot2LotGen(
nLots = 50,
sizeLot = 100,
unitSize = 500,
betaAlpha = 0.5112,
betaBeta = 9.959,
C0MeanLog = 1.023,
C0SdLog = 0.3267,
propVarInter = 0.7
)
smokedfish <- sfSmoking(dat,
rBrineMean = 0.871,
rBrineSd = 0.807,
rDrysaltMean = 1.093,
rDrysaltSd = 0.532,
saltingType = "salted"
)
hist(smokedfish$N)