{
  "resourceType" : "StructureMap",
  "id" : "CertICAOtoCoreDataSet",
  "meta" : {
    "versionId" : "15",
    "lastUpdated" : "2023-02-21T00:05:31.658+00:00"
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><pre>map &quot;http://smart.who.int/ddcc/StructureMap/CertICAOtoCoreDataSet&quot; = &quot;CertICAOtoCoreDataSet&quot;\r\n\r\n// Structure map transforming CertICAO logical model to bundle of Core Data Set logical model\r\n\r\nuses &quot;http://smart.who.int/ddcc/StructureDefinition/CertICAOVDS&quot; alias VDS as source\r\nuses &quot;http://hl7.org/fhir/StructureDefinition/Bundle&quot; alias DDCCBundle as target\r\nuses &quot;http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet&quot; alias DDCC as produced\r\nuses &quot;http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS&quot; alias DDCCVS as produced\r\nuses &quot;http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR&quot; alias DDCCTR as produced\r\n\r\ngroup CertICAOtoCoreDataSet(source src : VDS, target ddccBundle : DDCCBundle) {\r\n  src.data as data then {\r\n    data.msg as msg then {\r\n      msg.ve as ve then {\r\n        ve.vd as vd -&gt;  ddccBundle.entry as outentry,  create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS') as ddcc then {\r\n          data.hdr as hdr -&gt; ddcc.certificate as certificate then VDStoCoreDataSetCertificate(hdr, msg, certificate) &quot;set certificate&quot;;\r\n          msg.pid as pid then ExtractPatient(pid, ddcc) &quot;set patient&quot;;\r\n          vd -&gt; ddcc.vaccination as vaccination then ExtractVaccine(ve, vd, vaccination) &quot;set vaccination&quot;;\r\n          vd -&gt; outentry.resource = ddcc &quot;set outentry&quot;;\r\n        };\r\n      };\r\n      msg.tr as tr -&gt;  ddccBundle.entry as outentry,  create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR') as ddcc then {\r\n        data.hdr as hdr -&gt; ddcc.certificate as certificate then VDStoCoreDataSetCertificate(hdr, msg, certificate) &quot;set certificate&quot;;\r\n        msg.pid as pid then ExtractPatient(pid, ddcc) &quot;set patient&quot;;\r\n        msg.sp as sp then {\r\n          msg.dat as dat -&gt; ddcc.test as test then ExtractTest(sp, dat, tr, test) &quot;set test&quot;;\r\n        };\r\n        tr -&gt; outentry.resource = ddcc &quot;set outentry&quot;;\r\n      };\r\n    };\r\n  };\r\n}\r\n\r\ngroup VDStoCoreDataSetCertificate(source hdr, source msg, target certificate) {\r\n  hdr.v as v -&gt; certificate.version = v &quot;set version&quot;;\r\n  msg.uvci as uvci -&gt;  certificate.hcid as hcid,  hcid.value = uvci &quot;set hcid from uvci&quot;;\r\n  msg.utci as utci -&gt;  certificate.hcid as hcid,  hcid.value = utci &quot;set hcid from utci&quot;;\r\n  hdr.is as is -&gt;  certificate.issuer = create('Reference') as issuer,  issuer.display = is &quot;set issuer&quot;;\r\n}\r\n\r\ngroup ExtractPatient(source pid, target ddcc : DDCC) {\r\n  pid.n as name -&gt; ddcc.name = name &quot;set name&quot;;\r\n  pid.dob as birthDate -&gt; ddcc.birthDate = birthDate &quot;set birthDate&quot;;\r\n  pid.i as priorityIdentifier -&gt;  ddcc.identifier as identifier,  identifier.value = priorityIdentifier &quot;set priorityIdentifier&quot;;\r\n  pid.dn -&gt; ddcc.identifier as identifier then ExtractDocumentTypeNumber(pid, identifier) &quot;set Document Type Number&quot;;\r\n}\r\n\r\ngroup ExtractDocumentTypeNumber(source src, target identif : Identifier) {\r\n  src.dn as docNumber -&gt; identif.value = docNumber &quot;set doc number&quot;;\r\n  src.dt as docType where (docType = 'P') -&gt; identif.system = 'PPN' &quot;set doc number P&quot;;\r\n  // P – Passport (Doc 9303-4)\r\n  src.dt as docType where (docType = 'A') -&gt; identif.system = 'DL' &quot;set doc number A&quot;;\r\n  // A – ID Card (Doc 9303-5)\r\n  src.dt as docType where (docType = 'C') -&gt; identif.system = 'DL' &quot;set doc number C&quot;;\r\n  // C – ID Card (Doc 9303-5)\r\n  src.dt as docType where (docType = 'I') -&gt; identif.system = 'DL' &quot;set doc number I&quot;;\r\n  // I – ID Card Doc 9303-5)\r\n  src.dt as docType where (docType = 'AC') -&gt; identif.system = 'EN' &quot;set doc number AC&quot;;\r\n  // AC - Crew Member Certificate (Doc 9303-5)\r\n  src.dt as docType where (docType = 'V') -&gt; identif.system = 'ACSN' &quot;set doc number V&quot;;\r\n  // V – Visa (Doc 9303-7)\r\n  src.dt as docType where (docType = 'D') -&gt; identif.system = 'DL' &quot;set doc number D&quot;;\r\n}\r\n\r\ngroup ExtractVaccine(source ve, source vd, target vaccination) {\r\n  ve.des as des -&gt;  vaccination.vaccine as coding,  coding.system = 'http://id.who.int/icd11/mms',  coding.code = des &quot;set vaccine&quot;;\r\n  // brand code system is &quot;As defined by member state&quot;\r\n  ve.nam as nam -&gt;  vaccination.brand as coding,  coding.code = nam &quot;set brand&quot;;\r\n  ve.dis as dis -&gt;  vaccination.disease as coding,  coding.system = 'http://id.who.int/icd11/mms',  coding.code = dis &quot;set target disease&quot;;\r\n  vd.dvc as dvc -&gt; vaccination.date = dvc &quot;set date&quot;;\r\n  vd.seq as seq -&gt; vaccination.dose = seq &quot;set dose&quot;;\r\n  vd.dvn as dvn -&gt; vaccination.nextDose = dvn &quot;set nextDose&quot;;\r\n  vd.ctr as ctr -&gt; vaccination.country as coding then {\r\n    ctr then ExtractCountry(ctr, coding) &quot;set country&quot;;\r\n  };\r\n  vd.adm as adm -&gt; vaccination.centre = adm &quot;set centre&quot;;\r\n  vd.lot as lot -&gt; vaccination.lot = lot &quot;set lot&quot;;\r\n}\r\n\r\ngroup ExtractTest(source sp, source dat, source tr, target test) {\r\n  tr -&gt;  test.pathogen as coding,  coding.system = 'http://id.who.int/icd11/mms',  coding.code = 'XN109' &quot;set pathogen&quot;;\r\n  tr.tc as tc then {\r\n    tc -&gt;  test.type as coding,  coding.code = tc &quot;set default type&quot;;\r\n    tc -&gt; c('http://smart.who.int/ddcc/CodeSystem/lab-test-type-icao', tc) as coded then {\r\n      tc where coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-icao') -&gt; test.type = translate(coded, 'http://smart.who.int/ddcc/ConceptMap/lab-test-type-icao-to-icd11', 'Coding') &quot;translate ICAO type&quot;;\r\n    } &quot;coding&quot;;\r\n  };\r\n  tr.m as m then {\r\n    m -&gt;  test.origin as coding,  coding.code = m &quot;set default origin&quot;;\r\n    m -&gt; c('http://smart.who.int/ddcc/CodeSystem/lab-test-sample-origin-icao', m) as coded then {\r\n      m where coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-sample-origin-icao') -&gt; test.origin = translate(coded, 'http://smart.who.int/ddcc/ConceptMap/lab-test-sample-origin-icao-to-icd11', 'Coding') &quot;translate ICAO origin&quot;;\r\n    } &quot;coding&quot;;\r\n  };\r\n  dat.sc as date -&gt; test.date = date &quot;set date&quot;;\r\n  tr.r as r then {\r\n    r -&gt;  test.result as coding,  coding.code = r &quot;set default result&quot;;\r\n    r -&gt; c('http://smart.who.int/ddcc/CodeSystem/lab-test-qual-result-icao', r) as coded then {\r\n      r where coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-icao') -&gt; test.result = translate(coded, 'http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-icao-to-icd11', 'Coding') &quot;translate ICAO result&quot;;\r\n    } &quot;coding&quot;;\r\n  };\r\n  sp.spn as spn -&gt;  test.centre as coding,  coding.code = spn &quot;set centre&quot;;\r\n  sp.ctr as ctr -&gt; test.country as coding then {\r\n    ctr then ExtractCountry(ctr, coding) &quot;set country&quot;;\r\n  };\r\n}\r\n\r\ngroup ExtractCountry(source country, target coding) {\r\n  // ICAO Doc 9303-1 country codes are a superset of ISO 3166 3 letter codes\r\n  country -&gt; coding.code = country &quot;set default country&quot;;\r\n  country -&gt; c('urn:iso:std:iso:3166', country) as coded then {\r\n    country where coded.memberOf('http://hl7.org/fhir/ValueSet/iso3166-1-3') -&gt;  coding.code = country,  coding.system = 'urn:iso:std:iso:3166' &quot;set country with system&quot;;\r\n  } &quot;coded&quot;;\r\n}\r\n\r\n</pre></div>"
  },
  "url" : "http://smart.who.int/ddcc/StructureMap/CertICAOtoCoreDataSet",
  "version" : "1.0.0",
  "name" : "CertICAOtoCoreDataSet",
  "status" : "draft",
  "date" : "2023-11-07T06:07:49+00:00",
  "publisher" : "WHO",
  "contact" : [{
    "name" : "WHO",
    "telecom" : [{
      "system" : "url",
      "value" : "http://who.int"
    }]
  }],
  "description" : "Structure map transforming CertICAO logical model to bundle of Core Data Set logical model",
  "jurisdiction" : [{
    "coding" : [{
      "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
      "code" : "001"
    }]
  }],
  "structure" : [{
    "url" : "http://smart.who.int/ddcc/StructureDefinition/CertICAOVDS",
    "mode" : "source",
    "alias" : "VDS"
  },
  {
    "url" : "http://hl7.org/fhir/StructureDefinition/Bundle",
    "mode" : "target",
    "alias" : "DDCCBundle"
  },
  {
    "url" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet",
    "mode" : "produced",
    "alias" : "DDCC"
  },
  {
    "url" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS",
    "mode" : "produced",
    "alias" : "DDCCVS"
  },
  {
    "url" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR",
    "mode" : "produced",
    "alias" : "DDCCTR"
  }],
  "group" : [{
    "name" : "CertICAOtoCoreDataSet",
    "typeMode" : "none",
    "input" : [{
      "name" : "src",
      "type" : "VDS",
      "mode" : "source"
    },
    {
      "name" : "ddccBundle",
      "type" : "DDCCBundle",
      "mode" : "target"
    }],
    "rule" : [{
      "name" : "data",
      "source" : [{
        "context" : "src",
        "element" : "data",
        "variable" : "data"
      }],
      "rule" : [{
        "name" : "msg",
        "source" : [{
          "context" : "data",
          "element" : "msg",
          "variable" : "msg"
        }],
        "rule" : [{
          "name" : "ve",
          "source" : [{
            "context" : "msg",
            "element" : "ve",
            "variable" : "ve"
          }],
          "rule" : [{
            "name" : "vd",
            "source" : [{
              "context" : "ve",
              "element" : "vd",
              "variable" : "vd"
            }],
            "target" : [{
              "context" : "ddccBundle",
              "contextType" : "variable",
              "element" : "entry",
              "variable" : "outentry"
            },
            {
              "contextType" : "variable",
              "variable" : "ddcc",
              "transform" : "create",
              "parameter" : [{
                "valueString" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS"
              }]
            }],
            "rule" : [{
              "name" : "set certificate",
              "source" : [{
                "context" : "data",
                "element" : "hdr",
                "variable" : "hdr"
              }],
              "target" : [{
                "context" : "ddcc",
                "contextType" : "variable",
                "element" : "certificate",
                "variable" : "certificate"
              }],
              "dependent" : [{
                "name" : "VDStoCoreDataSetCertificate",
                "variable" : ["hdr",
                "msg",
                "certificate"]
              }]
            },
            {
              "name" : "set patient",
              "source" : [{
                "context" : "msg",
                "element" : "pid",
                "variable" : "pid"
              }],
              "dependent" : [{
                "name" : "ExtractPatient",
                "variable" : ["pid",
                "ddcc"]
              }]
            },
            {
              "name" : "set vaccination",
              "source" : [{
                "context" : "vd"
              }],
              "target" : [{
                "context" : "ddcc",
                "contextType" : "variable",
                "element" : "vaccination",
                "variable" : "vaccination"
              }],
              "dependent" : [{
                "name" : "ExtractVaccine",
                "variable" : ["ve",
                "vd",
                "vaccination"]
              }]
            },
            {
              "name" : "set outentry",
              "source" : [{
                "context" : "vd"
              }],
              "target" : [{
                "context" : "outentry",
                "contextType" : "variable",
                "element" : "resource",
                "transform" : "copy",
                "parameter" : [{
                  "valueId" : "ddcc"
                }]
              }]
            }]
          }]
        },
        {
          "name" : "tr",
          "source" : [{
            "context" : "msg",
            "element" : "tr",
            "variable" : "tr"
          }],
          "target" : [{
            "context" : "ddccBundle",
            "contextType" : "variable",
            "element" : "entry",
            "variable" : "outentry"
          },
          {
            "contextType" : "variable",
            "variable" : "ddcc",
            "transform" : "create",
            "parameter" : [{
              "valueString" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR"
            }]
          }],
          "rule" : [{
            "name" : "set certificate",
            "source" : [{
              "context" : "data",
              "element" : "hdr",
              "variable" : "hdr"
            }],
            "target" : [{
              "context" : "ddcc",
              "contextType" : "variable",
              "element" : "certificate",
              "variable" : "certificate"
            }],
            "dependent" : [{
              "name" : "VDStoCoreDataSetCertificate",
              "variable" : ["hdr",
              "msg",
              "certificate"]
            }]
          },
          {
            "name" : "set patient",
            "source" : [{
              "context" : "msg",
              "element" : "pid",
              "variable" : "pid"
            }],
            "dependent" : [{
              "name" : "ExtractPatient",
              "variable" : ["pid",
              "ddcc"]
            }]
          },
          {
            "name" : "sp",
            "source" : [{
              "context" : "msg",
              "element" : "sp",
              "variable" : "sp"
            }],
            "rule" : [{
              "name" : "set test",
              "source" : [{
                "context" : "msg",
                "element" : "dat",
                "variable" : "dat"
              }],
              "target" : [{
                "context" : "ddcc",
                "contextType" : "variable",
                "element" : "test",
                "variable" : "test"
              }],
              "dependent" : [{
                "name" : "ExtractTest",
                "variable" : ["sp",
                "dat",
                "tr",
                "test"]
              }]
            }]
          },
          {
            "name" : "set outentry",
            "source" : [{
              "context" : "tr"
            }],
            "target" : [{
              "context" : "outentry",
              "contextType" : "variable",
              "element" : "resource",
              "transform" : "copy",
              "parameter" : [{
                "valueId" : "ddcc"
              }]
            }]
          }]
        }]
      }]
    }]
  },
  {
    "name" : "VDStoCoreDataSetCertificate",
    "typeMode" : "none",
    "input" : [{
      "name" : "hdr",
      "mode" : "source"
    },
    {
      "name" : "msg",
      "mode" : "source"
    },
    {
      "name" : "certificate",
      "mode" : "target"
    }],
    "rule" : [{
      "name" : "set version",
      "source" : [{
        "context" : "hdr",
        "element" : "v",
        "variable" : "v"
      }],
      "target" : [{
        "context" : "certificate",
        "contextType" : "variable",
        "element" : "version",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "v"
        }]
      }]
    },
    {
      "name" : "set hcid from uvci",
      "source" : [{
        "context" : "msg",
        "element" : "uvci",
        "variable" : "uvci"
      }],
      "target" : [{
        "context" : "certificate",
        "contextType" : "variable",
        "element" : "hcid",
        "variable" : "hcid"
      },
      {
        "context" : "hcid",
        "contextType" : "variable",
        "element" : "value",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "uvci"
        }]
      }]
    },
    {
      "name" : "set hcid from utci",
      "source" : [{
        "context" : "msg",
        "element" : "utci",
        "variable" : "utci"
      }],
      "target" : [{
        "context" : "certificate",
        "contextType" : "variable",
        "element" : "hcid",
        "variable" : "hcid"
      },
      {
        "context" : "hcid",
        "contextType" : "variable",
        "element" : "value",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "utci"
        }]
      }]
    },
    {
      "name" : "set issuer",
      "source" : [{
        "context" : "hdr",
        "element" : "is",
        "variable" : "is"
      }],
      "target" : [{
        "context" : "certificate",
        "contextType" : "variable",
        "element" : "issuer",
        "variable" : "issuer",
        "transform" : "create",
        "parameter" : [{
          "valueString" : "Reference"
        }]
      },
      {
        "context" : "issuer",
        "contextType" : "variable",
        "element" : "display",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "is"
        }]
      }]
    }]
  },
  {
    "name" : "ExtractPatient",
    "typeMode" : "none",
    "input" : [{
      "name" : "pid",
      "mode" : "source"
    },
    {
      "name" : "ddcc",
      "type" : "DDCC",
      "mode" : "target"
    }],
    "rule" : [{
      "name" : "set name",
      "source" : [{
        "context" : "pid",
        "element" : "n",
        "variable" : "name"
      }],
      "target" : [{
        "context" : "ddcc",
        "contextType" : "variable",
        "element" : "name",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "name"
        }]
      }]
    },
    {
      "name" : "set birthDate",
      "source" : [{
        "context" : "pid",
        "element" : "dob",
        "variable" : "birthDate"
      }],
      "target" : [{
        "context" : "ddcc",
        "contextType" : "variable",
        "element" : "birthDate",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "birthDate"
        }]
      }]
    },
    {
      "name" : "set priorityIdentifier",
      "source" : [{
        "context" : "pid",
        "element" : "i",
        "variable" : "priorityIdentifier"
      }],
      "target" : [{
        "context" : "ddcc",
        "contextType" : "variable",
        "element" : "identifier",
        "variable" : "identifier"
      },
      {
        "context" : "identifier",
        "contextType" : "variable",
        "element" : "value",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "priorityIdentifier"
        }]
      }]
    },
    {
      "name" : "set Document Type Number",
      "source" : [{
        "context" : "pid",
        "element" : "dn"
      }],
      "target" : [{
        "context" : "ddcc",
        "contextType" : "variable",
        "element" : "identifier",
        "variable" : "identifier"
      }],
      "dependent" : [{
        "name" : "ExtractDocumentTypeNumber",
        "variable" : ["pid",
        "identifier"]
      }]
    }]
  },
  {
    "name" : "ExtractDocumentTypeNumber",
    "typeMode" : "none",
    "input" : [{
      "name" : "src",
      "mode" : "source"
    },
    {
      "name" : "identif",
      "type" : "Identifier",
      "mode" : "target"
    }],
    "rule" : [{
      "name" : "set doc number",
      "source" : [{
        "context" : "src",
        "element" : "dn",
        "variable" : "docNumber"
      }],
      "target" : [{
        "context" : "identif",
        "contextType" : "variable",
        "element" : "value",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "docNumber"
        }]
      }]
    },
    {
      "name" : "set doc number P",
      "source" : [{
        "context" : "src",
        "element" : "dt",
        "variable" : "docType",
        "condition" : "(docType = 'P')"
      }],
      "target" : [{
        "context" : "identif",
        "contextType" : "variable",
        "element" : "system",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "PPN"
        }]
      }]
    },
    {
      "name" : "set doc number A",
      "source" : [{
        "context" : "src",
        "element" : "dt",
        "variable" : "docType",
        "condition" : "(docType = 'A')"
      }],
      "target" : [{
        "context" : "identif",
        "contextType" : "variable",
        "element" : "system",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "DL"
        }]
      }],
      "documentation" : "P – Passport (Doc 9303-4)"
    },
    {
      "name" : "set doc number C",
      "source" : [{
        "context" : "src",
        "element" : "dt",
        "variable" : "docType",
        "condition" : "(docType = 'C')"
      }],
      "target" : [{
        "context" : "identif",
        "contextType" : "variable",
        "element" : "system",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "DL"
        }]
      }],
      "documentation" : "A – ID Card (Doc 9303-5)"
    },
    {
      "name" : "set doc number I",
      "source" : [{
        "context" : "src",
        "element" : "dt",
        "variable" : "docType",
        "condition" : "(docType = 'I')"
      }],
      "target" : [{
        "context" : "identif",
        "contextType" : "variable",
        "element" : "system",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "DL"
        }]
      }],
      "documentation" : "C – ID Card (Doc 9303-5)"
    },
    {
      "name" : "set doc number AC",
      "source" : [{
        "context" : "src",
        "element" : "dt",
        "variable" : "docType",
        "condition" : "(docType = 'AC')"
      }],
      "target" : [{
        "context" : "identif",
        "contextType" : "variable",
        "element" : "system",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "EN"
        }]
      }],
      "documentation" : "I – ID Card Doc 9303-5)"
    },
    {
      "name" : "set doc number V",
      "source" : [{
        "context" : "src",
        "element" : "dt",
        "variable" : "docType",
        "condition" : "(docType = 'V')"
      }],
      "target" : [{
        "context" : "identif",
        "contextType" : "variable",
        "element" : "system",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "ACSN"
        }]
      }],
      "documentation" : "AC - Crew Member Certificate (Doc 9303-5)"
    },
    {
      "name" : "set doc number D",
      "source" : [{
        "context" : "src",
        "element" : "dt",
        "variable" : "docType",
        "condition" : "(docType = 'D')"
      }],
      "target" : [{
        "context" : "identif",
        "contextType" : "variable",
        "element" : "system",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "DL"
        }]
      }],
      "documentation" : "V – Visa (Doc 9303-7)"
    }]
  },
  {
    "name" : "ExtractVaccine",
    "typeMode" : "none",
    "input" : [{
      "name" : "ve",
      "mode" : "source"
    },
    {
      "name" : "vd",
      "mode" : "source"
    },
    {
      "name" : "vaccination",
      "mode" : "target"
    }],
    "rule" : [{
      "name" : "set vaccine",
      "source" : [{
        "context" : "ve",
        "element" : "des",
        "variable" : "des"
      }],
      "target" : [{
        "context" : "vaccination",
        "contextType" : "variable",
        "element" : "vaccine",
        "variable" : "coding"
      },
      {
        "context" : "coding",
        "contextType" : "variable",
        "element" : "system",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "http://id.who.int/icd11/mms"
        }]
      },
      {
        "context" : "coding",
        "contextType" : "variable",
        "element" : "code",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "des"
        }]
      }]
    },
    {
      "name" : "set brand",
      "source" : [{
        "context" : "ve",
        "element" : "nam",
        "variable" : "nam"
      }],
      "target" : [{
        "context" : "vaccination",
        "contextType" : "variable",
        "element" : "brand",
        "variable" : "coding"
      },
      {
        "context" : "coding",
        "contextType" : "variable",
        "element" : "code",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "nam"
        }]
      }],
      "documentation" : "brand code system is \"As defined by member state\""
    },
    {
      "name" : "set target disease",
      "source" : [{
        "context" : "ve",
        "element" : "dis",
        "variable" : "dis"
      }],
      "target" : [{
        "context" : "vaccination",
        "contextType" : "variable",
        "element" : "disease",
        "variable" : "coding"
      },
      {
        "context" : "coding",
        "contextType" : "variable",
        "element" : "system",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "http://id.who.int/icd11/mms"
        }]
      },
      {
        "context" : "coding",
        "contextType" : "variable",
        "element" : "code",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "dis"
        }]
      }]
    },
    {
      "name" : "set date",
      "source" : [{
        "context" : "vd",
        "element" : "dvc",
        "variable" : "dvc"
      }],
      "target" : [{
        "context" : "vaccination",
        "contextType" : "variable",
        "element" : "date",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "dvc"
        }]
      }]
    },
    {
      "name" : "set dose",
      "source" : [{
        "context" : "vd",
        "element" : "seq",
        "variable" : "seq"
      }],
      "target" : [{
        "context" : "vaccination",
        "contextType" : "variable",
        "element" : "dose",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "seq"
        }]
      }]
    },
    {
      "name" : "set nextDose",
      "source" : [{
        "context" : "vd",
        "element" : "dvn",
        "variable" : "dvn"
      }],
      "target" : [{
        "context" : "vaccination",
        "contextType" : "variable",
        "element" : "nextDose",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "dvn"
        }]
      }]
    },
    {
      "name" : "ctr",
      "source" : [{
        "context" : "vd",
        "element" : "ctr",
        "variable" : "ctr"
      }],
      "target" : [{
        "context" : "vaccination",
        "contextType" : "variable",
        "element" : "country",
        "variable" : "coding"
      }],
      "rule" : [{
        "name" : "set country",
        "source" : [{
          "context" : "ctr"
        }],
        "dependent" : [{
          "name" : "ExtractCountry",
          "variable" : ["ctr",
          "coding"]
        }]
      }]
    },
    {
      "name" : "set centre",
      "source" : [{
        "context" : "vd",
        "element" : "adm",
        "variable" : "adm"
      }],
      "target" : [{
        "context" : "vaccination",
        "contextType" : "variable",
        "element" : "centre",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "adm"
        }]
      }]
    },
    {
      "name" : "set lot",
      "source" : [{
        "context" : "vd",
        "element" : "lot",
        "variable" : "lot"
      }],
      "target" : [{
        "context" : "vaccination",
        "contextType" : "variable",
        "element" : "lot",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "lot"
        }]
      }]
    }]
  },
  {
    "name" : "ExtractTest",
    "typeMode" : "none",
    "input" : [{
      "name" : "sp",
      "mode" : "source"
    },
    {
      "name" : "dat",
      "mode" : "source"
    },
    {
      "name" : "tr",
      "mode" : "source"
    },
    {
      "name" : "test",
      "mode" : "target"
    }],
    "rule" : [{
      "name" : "set pathogen",
      "source" : [{
        "context" : "tr"
      }],
      "target" : [{
        "context" : "test",
        "contextType" : "variable",
        "element" : "pathogen",
        "variable" : "coding"
      },
      {
        "context" : "coding",
        "contextType" : "variable",
        "element" : "system",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "http://id.who.int/icd11/mms"
        }]
      },
      {
        "context" : "coding",
        "contextType" : "variable",
        "element" : "code",
        "transform" : "copy",
        "parameter" : [{
          "valueString" : "XN109"
        }]
      }]
    },
    {
      "name" : "tc",
      "source" : [{
        "context" : "tr",
        "element" : "tc",
        "variable" : "tc"
      }],
      "rule" : [{
        "name" : "set default type",
        "source" : [{
          "context" : "tc"
        }],
        "target" : [{
          "context" : "test",
          "contextType" : "variable",
          "element" : "type",
          "variable" : "coding"
        },
        {
          "context" : "coding",
          "contextType" : "variable",
          "element" : "code",
          "transform" : "copy",
          "parameter" : [{
            "valueId" : "tc"
          }]
        }]
      },
      {
        "name" : "coding",
        "source" : [{
          "context" : "tc"
        }],
        "target" : [{
          "contextType" : "variable",
          "variable" : "coded",
          "transform" : "c",
          "parameter" : [{
            "valueString" : "http://smart.who.int/ddcc/CodeSystem/lab-test-type-icao"
          },
          {
            "valueId" : "tc"
          }]
        }],
        "rule" : [{
          "name" : "translate ICAO type",
          "source" : [{
            "context" : "tc",
            "condition" : "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-icao')"
          }],
          "target" : [{
            "context" : "test",
            "contextType" : "variable",
            "element" : "type",
            "transform" : "translate",
            "parameter" : [{
              "valueId" : "coded"
            },
            {
              "valueString" : "http://smart.who.int/ddcc/ConceptMap/lab-test-type-icao-to-icd11"
            },
            {
              "valueString" : "Coding"
            }]
          }]
        }]
      }]
    },
    {
      "name" : "m",
      "source" : [{
        "context" : "tr",
        "element" : "m",
        "variable" : "m"
      }],
      "rule" : [{
        "name" : "set default origin",
        "source" : [{
          "context" : "m"
        }],
        "target" : [{
          "context" : "test",
          "contextType" : "variable",
          "element" : "origin",
          "variable" : "coding"
        },
        {
          "context" : "coding",
          "contextType" : "variable",
          "element" : "code",
          "transform" : "copy",
          "parameter" : [{
            "valueId" : "m"
          }]
        }]
      },
      {
        "name" : "coding",
        "source" : [{
          "context" : "m"
        }],
        "target" : [{
          "contextType" : "variable",
          "variable" : "coded",
          "transform" : "c",
          "parameter" : [{
            "valueString" : "http://smart.who.int/ddcc/CodeSystem/lab-test-sample-origin-icao"
          },
          {
            "valueId" : "m"
          }]
        }],
        "rule" : [{
          "name" : "translate ICAO origin",
          "source" : [{
            "context" : "m",
            "condition" : "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-sample-origin-icao')"
          }],
          "target" : [{
            "context" : "test",
            "contextType" : "variable",
            "element" : "origin",
            "transform" : "translate",
            "parameter" : [{
              "valueId" : "coded"
            },
            {
              "valueString" : "http://smart.who.int/ddcc/ConceptMap/lab-test-sample-origin-icao-to-icd11"
            },
            {
              "valueString" : "Coding"
            }]
          }]
        }]
      }]
    },
    {
      "name" : "set date",
      "source" : [{
        "context" : "dat",
        "element" : "sc",
        "variable" : "date"
      }],
      "target" : [{
        "context" : "test",
        "contextType" : "variable",
        "element" : "date",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "date"
        }]
      }]
    },
    {
      "name" : "r",
      "source" : [{
        "context" : "tr",
        "element" : "r",
        "variable" : "r"
      }],
      "rule" : [{
        "name" : "set default result",
        "source" : [{
          "context" : "r"
        }],
        "target" : [{
          "context" : "test",
          "contextType" : "variable",
          "element" : "result",
          "variable" : "coding"
        },
        {
          "context" : "coding",
          "contextType" : "variable",
          "element" : "code",
          "transform" : "copy",
          "parameter" : [{
            "valueId" : "r"
          }]
        }]
      },
      {
        "name" : "coding",
        "source" : [{
          "context" : "r"
        }],
        "target" : [{
          "contextType" : "variable",
          "variable" : "coded",
          "transform" : "c",
          "parameter" : [{
            "valueString" : "http://smart.who.int/ddcc/CodeSystem/lab-test-qual-result-icao"
          },
          {
            "valueId" : "r"
          }]
        }],
        "rule" : [{
          "name" : "translate ICAO result",
          "source" : [{
            "context" : "r",
            "condition" : "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-icao')"
          }],
          "target" : [{
            "context" : "test",
            "contextType" : "variable",
            "element" : "result",
            "transform" : "translate",
            "parameter" : [{
              "valueId" : "coded"
            },
            {
              "valueString" : "http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-icao-to-icd11"
            },
            {
              "valueString" : "Coding"
            }]
          }]
        }]
      }]
    },
    {
      "name" : "set centre",
      "source" : [{
        "context" : "sp",
        "element" : "spn",
        "variable" : "spn"
      }],
      "target" : [{
        "context" : "test",
        "contextType" : "variable",
        "element" : "centre",
        "variable" : "coding"
      },
      {
        "context" : "coding",
        "contextType" : "variable",
        "element" : "code",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "spn"
        }]
      }]
    },
    {
      "name" : "ctr",
      "source" : [{
        "context" : "sp",
        "element" : "ctr",
        "variable" : "ctr"
      }],
      "target" : [{
        "context" : "test",
        "contextType" : "variable",
        "element" : "country",
        "variable" : "coding"
      }],
      "rule" : [{
        "name" : "set country",
        "source" : [{
          "context" : "ctr"
        }],
        "dependent" : [{
          "name" : "ExtractCountry",
          "variable" : ["ctr",
          "coding"]
        }]
      }]
    }]
  },
  {
    "name" : "ExtractCountry",
    "typeMode" : "none",
    "input" : [{
      "name" : "country",
      "mode" : "source"
    },
    {
      "name" : "coding",
      "mode" : "target"
    }],
    "rule" : [{
      "name" : "set default country",
      "source" : [{
        "context" : "country"
      }],
      "target" : [{
        "context" : "coding",
        "contextType" : "variable",
        "element" : "code",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "country"
        }]
      }],
      "documentation" : "ICAO Doc 9303-1 country codes are a superset of ISO 3166 3 letter codes"
    },
    {
      "name" : "coded",
      "source" : [{
        "context" : "country"
      }],
      "target" : [{
        "contextType" : "variable",
        "variable" : "coded",
        "transform" : "c",
        "parameter" : [{
          "valueString" : "urn:iso:std:iso:3166"
        },
        {
          "valueId" : "country"
        }]
      }],
      "rule" : [{
        "name" : "set country with system",
        "source" : [{
          "context" : "country",
          "condition" : "coded.memberOf('http://hl7.org/fhir/ValueSet/iso3166-1-3')"
        }],
        "target" : [{
          "context" : "coding",
          "contextType" : "variable",
          "element" : "code",
          "transform" : "copy",
          "parameter" : [{
            "valueId" : "country"
          }]
        },
        {
          "context" : "coding",
          "contextType" : "variable",
          "element" : "system",
          "transform" : "copy",
          "parameter" : [{
            "valueString" : "urn:iso:std:iso:3166"
          }]
        }]
      }]
    }]
  }]
}