@prefix fhir: . @prefix owl: . @prefix rdfs: . @prefix xsd: . # - resource ------------------------------------------------------------------- a fhir:StructureMap ; fhir:nodeRole fhir:treeRoot ; fhir:id [ fhir:v "CertDCCtoCoreDataSet"] ; # fhir:meta [ fhir:versionId [ fhir:v "35" ] ; fhir:lastUpdated [ fhir:v "2023-02-15T22:34:19.164+00:00"^^xsd:dateTime ] ] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "
map "http://smart.who.int/ddcc/StructureMap/CertDCCtoCoreDataSet" = "CertDCCtoCoreDataSet"\r\n\r\n// Structure map transforming CertDCC logical model to bundle of Core Data Set logical model\r\n\r\nuses "http://smart.who.int/ddcc/StructureDefinition/CertDCC" alias CWTPayload as source\r\nuses "http://hl7.org/fhir/StructureDefinition/Bundle" alias DDCCBundle as target\r\nuses "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet" alias DDCC as produced\r\nuses "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS" alias DDCCVS as produced\r\nuses "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR" alias DDCCTR as produced\r\n\r\ngroup CertDCCtoCoreDataSet(source src : CWTPayload, target ddccBundle : DDCCBundle) {\r\n  src."-260" as hcert then {\r\n    hcert."1" as dcc then {\r\n      dcc.v as v ->  ddccBundle.entry as outentry,  create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS') as ddcc then {\r\n        v then DCCtoCoreDataSet(dcc, ddcc) "set DDCC";\r\n        v -> ddcc.certificate as certificate then CertDCCtoCoreDataSetCertificate(src, dcc, v, certificate) "set certificate";\r\n        v -> ddcc.vaccination as vaccination then VtoCoreDataSetVS(v, vaccination) "set vaccination";\r\n        v -> outentry.resource = ddcc "set outentry";\r\n      };\r\n      dcc.t as t ->  ddccBundle.entry as outentry,  create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR') as ddcc then {\r\n        t then DCCtoCoreDataSet(dcc, ddcc) "set DDCC";\r\n        t -> ddcc.certificate as certificate then CertDCCtoCoreDataSetCertificate(src, dcc, t, certificate) "set certificate";\r\n        t -> ddcc.test as test then TtoCoreDataSetTR(t, test) "set test";\r\n        t -> outentry.resource = ddcc "set outentry";\r\n      };\r\n    } "eu_DCC_v1";\r\n  } "hcert";\r\n}\r\n\r\ngroup DCCtoCoreDataSet(source dcc, target ddcc : DDCC) {\r\n  dcc.dob as birthDate -> ddcc.birthDate = birthDate "set birthDate";\r\n  dcc.nam as nam then {\r\n    nam.gn as given -> ddcc.name = (given.replaceMatches('$', ' ')) "set given name";\r\n    nam.fn as family ->  ddcc.name as tName,  ddcc.name = append(tName, family) "add family name";\r\n  };\r\n}\r\n\r\ngroup CertDCCtoCoreDataSetCertificate(source src : CWTPayload, source dcc, source g, target certificate) {\r\n  src -> certificate.period = create('Period') as period then CwtToPeriod(src, period) "set period";\r\n  dcc.ver as ver -> certificate.version = ver "set version";\r\n  g.ci as ci ->  certificate.hcid as hcid,  hcid.value = ci "set hcid";\r\n  g.is as is ->  certificate.issuer = create('Reference') as issuer,  issuer.display = is "set issuer";\r\n}\r\n\r\ngroup CwtToPeriod(source src : CWTPayload, target tgt : Period) {\r\n  src."6" as iat ->  append(iat, ' seconds') as epoch,  tgt.start = (@1970-01-01T00:00:00.000+00:00 + epoch.toQuantity()) "set period start";\r\n  src."4" as exp ->  append(exp, ' seconds') as epoch,  tgt.end = (@1970-01-01T00:00:00.000+00:00 + epoch.toQuantity()) "set period end";\r\n}\r\n\r\ngroup VtoCoreDataSetVS(source v, target vaccination) {\r\n  v.tg as tg ->  vaccination.disease as coding,  coding.system = 'http://snomed.info/sct',  coding.code = tg "set target disease";\r\n  v.vp as vp ->  vaccination.vaccine as coding,  coding.system = 'https://ec.europa.eu/health/documents/community-register/html/',  coding.code = vp "set vaccine";\r\n  v.mp as mp then {\r\n    mp ->  vaccination.brand as coding,  coding.system = 'https://id.uvci.eu/valuesets/vaccine-medicinal-product.json',  coding.code = mp "set default brand";\r\n    mp -> c('https://ec.europa.eu/health/documents/community-register/html/', mp) as coded then {\r\n      mp where coded.memberOf('http://smart.who.int/ddcc/ValueSet/vaccine-covid19-euur') -> vaccination.brand = translate(coded, 'http://smart.who.int/ddcc/ConceptMap/vaccine-covid19-euur-to-icd11', 'Coding') "translate COVID19 brand";\r\n    } "coding";\r\n  };\r\n  v.ma as ma ->  vaccination.maholder as coding,  coding.system = 'https://id.uvci.eu/valuesets/vaccine-mah-manf.json',  coding.code = ma "set maholder";\r\n  v.dt as date -> vaccination.date = date "set date";\r\n  v.dn as dose -> vaccination.dose = dose "set dose";\r\n  v.sd as totalDoses -> vaccination.totalDoses = totalDoses "set totalDoses";\r\n  v.co as co ->  vaccination.country as coding,  coding.code = co,  coding.system = 'urn:iso:std:iso:3166' "set country";\r\n}\r\n\r\ngroup TtoCoreDataSetTR(source t, target test) {\r\n  t.tg as tg then {\r\n    tg ->  test.pathogen as coding,  coding.system = 'http://snomed.info/sct',  coding.code = tg "set default pathogen";\r\n    tg -> c('http://snomed.info/sct', tg) as coded then {\r\n      tg where coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-pathogen-covid19-snomed') -> test.pathogen = translate(coded, 'http://smart.who.int/ddcc/ConceptMap/lab-test-pathogen-snomed-to-icd11', 'Coding') "translate COVID19 pathogen";\r\n    } "coding";\r\n  };\r\n  t.tt as tt then {\r\n    tt ->  test.type as coding,  coding.system = 'http://loinc.org',  coding.code = tt "set default type";\r\n    tt -> c('http://loinc.org', tt) as coded then {\r\n      tt where coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-covid19-loinc') -> test.type = translate(coded, 'http://smart.who.int/ddcc/ConceptMap/lab-test-type-covid19-loinc-to-icd11', 'Coding') "translate COVID19 type";\r\n    } "coding";\r\n  };\r\n  t.nm as nm ->  test.brand as coding,  coding.system = 'https://id.uvci.eu/valuesets/test-manf.json',  coding.code = nm "set brand";\r\n  t.ma as ma ->  test.manufacturer as coding,  coding.system = 'https://covid-19-diagnostics.jrc.ec.europa.eu/devices',  coding.code = ma "set manufacturer";\r\n  t.sc as date -> test.date = date "set date";\r\n  t.tr as tr then {\r\n    tr ->  test.result as coding,  coding.system = 'http://snomed.info/sct',  coding.code = tr "set default result";\r\n    tr -> c('http://snomed.info/sct', tr) as coded then {\r\n      tr where coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-snomed') -> test.result = translate(coded, 'http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-snomed-to-icd11', 'Coding') "translate COVID19 result";\r\n    } "coding";\r\n  };\r\n  t.tc as tc ->  test.centre as coding,  coding.code = tc "set centre";\r\n  t.co as co ->  test.country as coding,  coding.code = co,  coding.system = 'urn:iso:std:iso:3166' "set country";\r\n}\r\n\r\n
" ] ; # fhir:url [ fhir:v "http://smart.who.int/ddcc/StructureMap/CertDCCtoCoreDataSet"^^xsd:anyURI] ; # fhir:version [ fhir:v "1.0.0"] ; # fhir:name [ fhir:v "CertDCCtoCoreDataSet"] ; # fhir:status [ fhir:v "draft"] ; # fhir:date [ fhir:v "2023-11-07T06:07:49+00:00"^^xsd:dateTime] ; # fhir:publisher [ fhir:v "WHO"] ; # fhir:contact ( [ fhir:name [ fhir:v "WHO" ] ; fhir:telecom ( [ fhir:system [ fhir:v "url" ] ; fhir:value [ fhir:v "http://who.int" ] ] ) ] ) ; # fhir:description [ fhir:v "Structure map transforming CertDCC logical model to bundle of Core Data Set logical model"] ; # fhir:jurisdiction ( [ fhir:coding ( [ fhir:system [ fhir:v "http://unstats.un.org/unsd/methods/m49/m49.htm"^^xsd:anyURI ] ; fhir:code [ fhir:v "001" ] ] ) ] ) ; # fhir:structure ( [ fhir:url [ fhir:v "http://smart.who.int/ddcc/StructureDefinition/CertDCC"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "source" ] ; fhir:alias [ fhir:v "CWTPayload" ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/Bundle"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "target" ] ; fhir:alias [ fhir:v "DDCCBundle" ] ] [ fhir:url [ fhir:v "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "produced" ] ; fhir:alias [ fhir:v "DDCC" ] ] [ fhir:url [ fhir:v "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "produced" ] ; fhir:alias [ fhir:v "DDCCVS" ] ] [ fhir:url [ fhir:v "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "produced" ] ; fhir:alias [ fhir:v "DDCCTR" ] ] ) ; # fhir:group ( [ fhir:name [ fhir:v "CertDCCtoCoreDataSet" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:input ( [ fhir:name [ fhir:v "src" ] ; fhir:type [ fhir:v "CWTPayload" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "ddccBundle" ] ; fhir:type [ fhir:v "DDCCBundle" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "hcert" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "-260" ] ; fhir:variable [ fhir:v "hcert" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "eu_DCC_v1" ] ; fhir:source ( [ fhir:context [ fhir:v "hcert" ] ; fhir:element [ fhir:v "1" ] ; fhir:variable [ fhir:v "dcc" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "v" ] ; fhir:source ( [ fhir:context [ fhir:v "dcc" ] ; fhir:element [ fhir:v "v" ] ; fhir:variable [ fhir:v "v" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddccBundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "outentry" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "ddcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.VS" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set DDCC" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "DCCtoCoreDataSet" ] ; fhir:variable ( [ fhir:v "dcc" ] [ fhir:v "ddcc" ] ) ] ) ] [ fhir:name [ fhir:v "set certificate" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "certificate" ] ; fhir:variable [ fhir:v "certificate" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "CertDCCtoCoreDataSetCertificate" ] ; fhir:variable ( [ fhir:v "src" ] [ fhir:v "dcc" ] [ fhir:v "v" ] [ fhir:v "certificate" ] ) ] ) ] [ fhir:name [ fhir:v "set vaccination" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "vaccination" ] ; fhir:variable [ fhir:v "vaccination" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "VtoCoreDataSetVS" ] ; fhir:variable ( [ fhir:v "v" ] [ fhir:v "vaccination" ] ) ] ) ] [ fhir:name [ fhir:v "set outentry" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "outentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "ddcc" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "t" ] ; fhir:source ( [ fhir:context [ fhir:v "dcc" ] ; fhir:element [ fhir:v "t" ] ; fhir:variable [ fhir:v "t" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddccBundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "outentry" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "ddcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet.TR" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set DDCC" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "DCCtoCoreDataSet" ] ; fhir:variable ( [ fhir:v "dcc" ] [ fhir:v "ddcc" ] ) ] ) ] [ fhir:name [ fhir:v "set certificate" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "certificate" ] ; fhir:variable [ fhir:v "certificate" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "CertDCCtoCoreDataSetCertificate" ] ; fhir:variable ( [ fhir:v "src" ] [ fhir:v "dcc" ] [ fhir:v "t" ] [ fhir:v "certificate" ] ) ] ) ] [ fhir:name [ fhir:v "set test" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "test" ] ; fhir:variable [ fhir:v "test" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "TtoCoreDataSetTR" ] ; fhir:variable ( [ fhir:v "t" ] [ fhir:v "test" ] ) ] ) ] [ fhir:name [ fhir:v "set outentry" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "outentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "ddcc" ] ] ) ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "DCCtoCoreDataSet" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:input ( [ fhir:name [ fhir:v "dcc" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "ddcc" ] ; fhir:type [ fhir:v "DDCC" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set birthDate" ] ; fhir:source ( [ fhir:context [ fhir:v "dcc" ] ; fhir:element [ fhir:v "dob" ] ; fhir:variable [ fhir:v "birthDate" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "birthDate" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "birthDate" ] ] ) ] ) ] [ fhir:name [ fhir:v "nam" ] ; fhir:source ( [ fhir:context [ fhir:v "dcc" ] ; fhir:element [ fhir:v "nam" ] ; fhir:variable [ fhir:v "nam" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set given name" ] ; fhir:source ( [ fhir:context [ fhir:v "nam" ] ; fhir:element [ fhir:v "gn" ] ; fhir:variable [ fhir:v "given" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:transform [ fhir:v "evaluate" ] ; fhir:parameter ( [ fhir:value [ fhir:v "given.replaceMatches('$', ' ')" ] ] ) ] ) ] [ fhir:name [ fhir:v "add family name" ] ; fhir:source ( [ fhir:context [ fhir:v "nam" ] ; fhir:element [ fhir:v "fn" ] ; fhir:variable [ fhir:v "family" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:variable [ fhir:v "tName" ] ] [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:transform [ fhir:v "append" ] ; fhir:parameter ( [ fhir:value [ fhir:v "tName" ] ] [ fhir:value [ fhir:v "family" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "CertDCCtoCoreDataSetCertificate" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:input ( [ fhir:name [ fhir:v "src" ] ; fhir:type [ fhir:v "CWTPayload" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "dcc" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "g" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "certificate" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set period" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "certificate" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "period" ] ; fhir:variable [ fhir:v "period" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Period" ] ] ) ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "CwtToPeriod" ] ; fhir:variable ( [ fhir:v "src" ] [ fhir:v "period" ] ) ] ) ] [ fhir:name [ fhir:v "set version" ] ; fhir:source ( [ fhir:context [ fhir:v "dcc" ] ; fhir:element [ fhir:v "ver" ] ; fhir:variable [ fhir:v "ver" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "certificate" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "version" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "ver" ] ] ) ] ) ] [ fhir:name [ fhir:v "set hcid" ] ; fhir:source ( [ fhir:context [ fhir:v "g" ] ; fhir:element [ fhir:v "ci" ] ; fhir:variable [ fhir:v "ci" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "certificate" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "hcid" ] ; fhir:variable [ fhir:v "hcid" ] ] [ fhir:context [ fhir:v "hcid" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "value" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "ci" ] ] ) ] ) ] [ fhir:name [ fhir:v "set issuer" ] ; fhir:source ( [ fhir:context [ fhir:v "g" ] ; fhir:element [ fhir:v "is" ] ; fhir:variable [ fhir:v "is" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "certificate" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "issuer" ] ; fhir:variable [ fhir:v "issuer" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Reference" ] ] ) ] [ fhir:context [ fhir:v "issuer" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "is" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "CwtToPeriod" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:input ( [ fhir:name [ fhir:v "src" ] ; fhir:type [ fhir:v "CWTPayload" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "tgt" ] ; fhir:type [ fhir:v "Period" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set period start" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "6" ] ; fhir:variable [ fhir:v "iat" ] ] ) ; fhir:target ( [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "epoch" ] ; fhir:transform [ fhir:v "append" ] ; fhir:parameter ( [ fhir:value [ fhir:v "iat" ] ] [ fhir:value [ fhir:v " seconds" ] ] ) ] [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "start" ] ; fhir:transform [ fhir:v "evaluate" ] ; fhir:parameter ( [ fhir:value [ fhir:v "@1970-01-01T00:00:00.000+00:00 + epoch.toQuantity()" ] ] ) ] ) ] [ fhir:name [ fhir:v "set period end" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "4" ] ; fhir:variable [ fhir:v "exp" ] ] ) ; fhir:target ( [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "epoch" ] ; fhir:transform [ fhir:v "append" ] ; fhir:parameter ( [ fhir:value [ fhir:v "exp" ] ] [ fhir:value [ fhir:v " seconds" ] ] ) ] [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "end" ] ; fhir:transform [ fhir:v "evaluate" ] ; fhir:parameter ( [ fhir:value [ fhir:v "@1970-01-01T00:00:00.000+00:00 + epoch.toQuantity()" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "VtoCoreDataSetVS" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:input ( [ fhir:name [ fhir:v "v" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "vaccination" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set target disease" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ; fhir:element [ fhir:v "tg" ] ; fhir:variable [ fhir:v "tg" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "vaccination" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "disease" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://snomed.info/sct" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "tg" ] ] ) ] ) ] [ fhir:name [ fhir:v "set vaccine" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ; fhir:element [ fhir:v "vp" ] ; fhir:variable [ fhir:v "vp" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "vaccination" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "vaccine" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "https://ec.europa.eu/health/documents/community-register/html/" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "vp" ] ] ) ] ) ] [ fhir:name [ fhir:v "mp" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ; fhir:element [ fhir:v "mp" ] ; fhir:variable [ fhir:v "mp" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set default brand" ] ; fhir:source ( [ fhir:context [ fhir:v "mp" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "vaccination" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "brand" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "https://id.uvci.eu/valuesets/vaccine-medicinal-product.json" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "mp" ] ] ) ] ) ] [ fhir:name [ fhir:v "coding" ] ; fhir:source ( [ fhir:context [ fhir:v "mp" ] ] ) ; fhir:target ( [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coded" ] ; fhir:transform [ fhir:v "c" ] ; fhir:parameter ( [ fhir:value [ fhir:v "https://ec.europa.eu/health/documents/community-register/html/" ] ] [ fhir:value [ fhir:v "mp" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "translate COVID19 brand" ] ; fhir:source ( [ fhir:context [ fhir:v "mp" ] ; fhir:condition [ fhir:v "coded.memberOf('http://smart.who.int/ddcc/ValueSet/vaccine-covid19-euur')" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "vaccination" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "brand" ] ; fhir:transform [ fhir:v "translate" ] ; fhir:parameter ( [ fhir:value [ fhir:v "coded" ] ] [ fhir:value [ fhir:v "http://smart.who.int/ddcc/ConceptMap/vaccine-covid19-euur-to-icd11" ] ] [ fhir:value [ fhir:v "Coding" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set maholder" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ; fhir:element [ fhir:v "ma" ] ; fhir:variable [ fhir:v "ma" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "vaccination" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "maholder" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "https://id.uvci.eu/valuesets/vaccine-mah-manf.json" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "ma" ] ] ) ] ) ] [ fhir:name [ fhir:v "set date" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ; fhir:element [ fhir:v "dt" ] ; fhir:variable [ fhir:v "date" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "vaccination" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "date" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "date" ] ] ) ] ) ] [ fhir:name [ fhir:v "set dose" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ; fhir:element [ fhir:v "dn" ] ; fhir:variable [ fhir:v "dose" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "vaccination" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "dose" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "dose" ] ] ) ] ) ] [ fhir:name [ fhir:v "set totalDoses" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ; fhir:element [ fhir:v "sd" ] ; fhir:variable [ fhir:v "totalDoses" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "vaccination" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "totalDoses" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "totalDoses" ] ] ) ] ) ] [ fhir:name [ fhir:v "set country" ] ; fhir:source ( [ fhir:context [ fhir:v "v" ] ; fhir:element [ fhir:v "co" ] ; fhir:variable [ fhir:v "co" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "vaccination" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "country" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "co" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "urn:iso:std:iso:3166" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "TtoCoreDataSetTR" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:input ( [ fhir:name [ fhir:v "t" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "test" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "tg" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "tg" ] ; fhir:variable [ fhir:v "tg" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set default pathogen" ] ; fhir:source ( [ fhir:context [ fhir:v "tg" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "pathogen" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://snomed.info/sct" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "tg" ] ] ) ] ) ] [ fhir:name [ fhir:v "coding" ] ; fhir:source ( [ fhir:context [ fhir:v "tg" ] ] ) ; fhir:target ( [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coded" ] ; fhir:transform [ fhir:v "c" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://snomed.info/sct" ] ] [ fhir:value [ fhir:v "tg" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "translate COVID19 pathogen" ] ; fhir:source ( [ fhir:context [ fhir:v "tg" ] ; fhir:condition [ fhir:v "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-pathogen-covid19-snomed')" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "pathogen" ] ; fhir:transform [ fhir:v "translate" ] ; fhir:parameter ( [ fhir:value [ fhir:v "coded" ] ] [ fhir:value [ fhir:v "http://smart.who.int/ddcc/ConceptMap/lab-test-pathogen-snomed-to-icd11" ] ] [ fhir:value [ fhir:v "Coding" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "tt" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "tt" ] ; fhir:variable [ fhir:v "tt" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set default type" ] ; fhir:source ( [ fhir:context [ fhir:v "tt" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "type" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "tt" ] ] ) ] ) ] [ fhir:name [ fhir:v "coding" ] ; fhir:source ( [ fhir:context [ fhir:v "tt" ] ] ) ; fhir:target ( [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coded" ] ; fhir:transform [ fhir:v "c" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] [ fhir:value [ fhir:v "tt" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "translate COVID19 type" ] ; fhir:source ( [ fhir:context [ fhir:v "tt" ] ; fhir:condition [ fhir:v "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-covid19-loinc')" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "type" ] ; fhir:transform [ fhir:v "translate" ] ; fhir:parameter ( [ fhir:value [ fhir:v "coded" ] ] [ fhir:value [ fhir:v "http://smart.who.int/ddcc/ConceptMap/lab-test-type-covid19-loinc-to-icd11" ] ] [ fhir:value [ fhir:v "Coding" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set brand" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "nm" ] ; fhir:variable [ fhir:v "nm" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "brand" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "https://id.uvci.eu/valuesets/test-manf.json" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "nm" ] ] ) ] ) ] [ fhir:name [ fhir:v "set manufacturer" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "ma" ] ; fhir:variable [ fhir:v "ma" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "manufacturer" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "https://covid-19-diagnostics.jrc.ec.europa.eu/devices" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "ma" ] ] ) ] ) ] [ fhir:name [ fhir:v "set date" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "sc" ] ; fhir:variable [ fhir:v "date" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "date" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "date" ] ] ) ] ) ] [ fhir:name [ fhir:v "tr" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "tr" ] ; fhir:variable [ fhir:v "tr" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set default result" ] ; fhir:source ( [ fhir:context [ fhir:v "tr" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "result" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://snomed.info/sct" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "tr" ] ] ) ] ) ] [ fhir:name [ fhir:v "coding" ] ; fhir:source ( [ fhir:context [ fhir:v "tr" ] ] ) ; fhir:target ( [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "coded" ] ; fhir:transform [ fhir:v "c" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://snomed.info/sct" ] ] [ fhir:value [ fhir:v "tr" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "translate COVID19 result" ] ; fhir:source ( [ fhir:context [ fhir:v "tr" ] ; fhir:condition [ fhir:v "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-snomed')" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "result" ] ; fhir:transform [ fhir:v "translate" ] ; fhir:parameter ( [ fhir:value [ fhir:v "coded" ] ] [ fhir:value [ fhir:v "http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-snomed-to-icd11" ] ] [ fhir:value [ fhir:v "Coding" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set centre" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "tc" ] ; fhir:variable [ fhir:v "tc" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "centre" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "tc" ] ] ) ] ) ] [ fhir:name [ fhir:v "set country" ] ; fhir:source ( [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "co" ] ; fhir:variable [ fhir:v "co" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "country" ] ; fhir:variable [ fhir:v "coding" ] ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "co" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "urn:iso:std:iso:3166" ] ] ) ] ) ] ) ] ) . # # -------------------------------------------------------------------------------------