@prefix fhir: . @prefix owl: . @prefix rdf: . @prefix rdfs: . @prefix xsd: . # - resource ------------------------------------------------------------------- a fhir:StructureMap ; fhir:nodeRole fhir:treeRoot ; fhir:id [ fhir:v "SHCToCoreDataSetTR"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "

Generated Narrative: StructureMap SHCToCoreDataSetTR

#xD;\nmap \"http://smart.who.int/ddcc/StructureMap/SHCToCoreDataSetTR\" = \"SHCToCoreDataSetTR\"#xD;\n#xD;\nuses \"http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-infectious-disease-laboratory-bundle-dm\" alias SHCLabBundleDM as source#xD;\nuses \"http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-patient-general-dm\" alias SHCPatientDM as source#xD;\nuses \"http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-infectious-disease-laboratory-result-observation-dm\" alias SHCLabDM as source#xD;\nuses \"http://hl7.org/fhir/StructureDefinition/Bundle\" alias DDCCBundle as target#xD;\nuses \"http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR\" alias DDCCTR as target#xD;\n#xD;\ngroup SHCToTR(source shc : SHCLabBundleDM, target ddccBundle : DDCCBundle) {#xD;\n  shc.entry as patientEntrySHC then {#xD;\n    patientEntrySHC.resource : Patient first as patient then {#xD;\n      shc.entry as entry then {#xD;\n        // entry.resource : Immunization as immunization where vaccineCode.memberOf('http://smart.who.int/ddcc/ValueSet/who-ddcc-allowed-vaccines-covid-19') ->  ddccBundle.entry as outentry,  create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetVS') as ddcc then {#xD;\n        entry.resource : Observation as lab ->  ddccBundle.entry as outentry,  create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR') as ddcc then {#xD;\n          lab then PatientToDDCCTR(patient, ddcc) \"set patient\";#xD;\n          lab -> ddcc.test as test then LabToDDCC(lab, test) \"set test\";#xD;\n          lab -> outentry.resource = ddcc \"set outentry\";#xD;\n        } \"labs\";#xD;\n      } \"entries\";#xD;\n    } \"get patient\";#xD;\n  } \"find patient\";#xD;\n}#xD;\n#xD;\ngroup PatientToDDCCTR(source patient : SHCPatientDM, target tgt : DDCCTR) {#xD;\n  patient.name as name then NameToText(name, tgt) \"set name\";#xD;\n  patient.birthDate as birthDate -> tgt.birthDate = birthDate \"set birthDate\";#xD;\n  patient.identifier first as identifier -> tgt.identifier = identifier \"set identifier\";#xD;\n}#xD;\n#xD;\ngroup NameToText(source name : HumanName, target ddcc) {#xD;\n  // append doesn't work until ddcc.name is set#xD;\n  name.given first as given -> ddcc.name = (given.replaceMatches('$', ' ')) \"set first name\";#xD;\n  // name.given not_first as other -> ddcc.name as tName, ddcc.name = append( tName, other ) \"set other names\";#xD;\n  name.given not_first as other ->  ddcc.name as tName,  (other.replaceMatches('$', ' ')) as spaced,  ddcc.name = append(tName, spaced) \"set other names\";#xD;\n  name.family as family ->  ddcc.name as tName,  ddcc.name = append(tName, family) \"add family name\";#xD;\n  name.text as text -> ddcc.name = text \"set full name\";#xD;\n}#xD;\n#xD;\ngroup LabToDDCC(source lab : SHCLabDM, target test) {#xD;\n  lab.code as code then {#xD;\n    code.coding first as labType then {#xD;\n      labType -> test.type = labType \"set default type\";#xD;\n      labType where labType.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-covid19-loinc') -> test.type = translate(labType, 'http://smart.who.int/ddcc/ConceptMap/lab-test-type-covid19-loinc-to-icd11', 'Coding') \"translate loinc type\";#xD;\n      labType where labType.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-covid19-loinc') -> test.pathogen = c('http://id.who.int/icd11/mms', 'XN109') \"set pathogen to COVID\";#xD;\n    };#xD;\n  };#xD;\n  lab.effectiveDateTime as date -> test.date = date \"set date\";#xD;\n  lab.valueCodeableConcept as value then {#xD;\n    value.coding first as result then {#xD;\n      result -> test.result = result \"set default result\";#xD;\n      result where result.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-snomed') -> test.result = translate(result, 'http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-snomed-to-icd11') \"translate snomed result\";#xD;\n    };#xD;\n  };#xD;\n// no target for result valueQuantity (for Ab titers) or valueString (for unmapped text)#xD;\n// pathogen and country are required, no source in SHC#xD;\n}#xD;\n#xD;\n
"^^rdf:XMLLiteral ] ; # fhir:url [ fhir:v "http://smart.who.int/ddcc/StructureMap/SHCToCoreDataSetTR"^^xsd:anyURI] ; # fhir:version [ fhir:v "1.0.0"] ; # fhir:name [ fhir:v "SHCToCoreDataSetTR"] ; # fhir:status [ fhir:v "draft"] ; # fhir:date [ fhir:v "2025-09-16T14:25:53+00:00"^^xsd:dateTime] ; # fhir:publisher [ fhir:v "WHO"] ; # fhir:contact ( [ fhir:name [ fhir:v "WHO" ] ; fhir:telecom ( [ fhir:system [ fhir:v "url" ] ; fhir:value [ fhir:v "http://who.int" ] ] ) ] ) ; # fhir:jurisdiction ( [ fhir:coding ( [ fhir:system [ fhir:v "http://unstats.un.org/unsd/methods/m49/m49.htm"^^xsd:anyURI ] ; fhir:code [ fhir:v "001" ] ] ) ] ) ; # fhir:structure ( [ fhir:url [ fhir:v "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-infectious-disease-laboratory-bundle-dm"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "source" ] ; fhir:alias [ fhir:v "SHCLabBundleDM" ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-patient-general-dm"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "source" ] ; fhir:alias [ fhir:v "SHCPatientDM" ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/uv/shc-vaccination/StructureDefinition/shc-infectious-disease-laboratory-result-observation-dm"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "source" ] ; fhir:alias [ fhir:v "SHCLabDM" ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/Bundle"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "target" ] ; fhir:alias [ fhir:v "DDCCBundle" ] ] [ fhir:url [ fhir:v "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "target" ] ; fhir:alias [ fhir:v "DDCCTR" ] ] ) ; # fhir:group ( [ fhir:name [ fhir:v "SHCToTR" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:input ( [ fhir:name [ fhir:v "shc" ] ; fhir:type [ fhir:v "SHCLabBundleDM" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "ddccBundle" ] ; fhir:type [ fhir:v "DDCCBundle" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "find patient" ] ; fhir:source ( [ fhir:context [ fhir:v "shc" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "patientEntrySHC" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "get patient" ] ; fhir:source ( [ fhir:context [ fhir:v "patientEntrySHC" ] ; fhir:type [ fhir:v "Patient" ] ; fhir:element [ fhir:v "resource" ] ; fhir:listMode [ fhir:v "first" ] ; fhir:variable [ fhir:v "patient" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "entries" ] ; fhir:source ( [ fhir:context [ fhir:v "shc" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "labs" ] ; fhir:source ( [ fhir:context [ fhir:v "entry" ] ; fhir:type [ fhir:v "Observation" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "lab" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddccBundle" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "outentry" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "ddcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ a fhir:string ; fhir:v "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set patient" ] ; fhir:source ( [ fhir:context [ fhir:v "lab" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "PatientToDDCCTR" ] ; fhir:variable ( [ fhir:v "patient" ] [ fhir:v "ddcc" ] ) ] ) ] [ fhir:name [ fhir:v "set test" ] ; fhir:source ( [ fhir:context [ fhir:v "lab" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "test" ] ; fhir:variable [ fhir:v "test" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "LabToDDCC" ] ; fhir:variable ( [ fhir:v "lab" ] [ fhir:v "test" ] ) ] ) ] [ fhir:name [ fhir:v "set outentry" ] ; fhir:source ( [ fhir:context [ fhir:v "lab" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "outentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "ddcc" ] ] ) ] ) ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "PatientToDDCCTR" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:input ( [ fhir:name [ fhir:v "patient" ] ; fhir:type [ fhir:v "SHCPatientDM" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "tgt" ] ; fhir:type [ fhir:v "DDCCTR" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set name" ] ; fhir:source ( [ fhir:context [ fhir:v "patient" ] ; fhir:element [ fhir:v "name" ] ; fhir:variable [ fhir:v "name" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "NameToText" ] ; fhir:variable ( [ fhir:v "name" ] [ fhir:v "tgt" ] ) ] ) ] [ fhir:name [ fhir:v "set birthDate" ] ; fhir:source ( [ fhir:context [ fhir:v "patient" ] ; fhir:element [ fhir:v "birthDate" ] ; fhir:variable [ fhir:v "birthDate" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "birthDate" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "birthDate" ] ] ) ] ) ] [ fhir:name [ fhir:v "set identifier" ] ; fhir:source ( [ fhir:context [ fhir:v "patient" ] ; fhir:element [ fhir:v "identifier" ] ; fhir:listMode [ fhir:v "first" ] ; fhir:variable [ fhir:v "identifier" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "identifier" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "identifier" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "NameToText" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:input ( [ fhir:name [ fhir:v "name" ] ; fhir:type [ fhir:v "HumanName" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "ddcc" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set first name" ] ; fhir:source ( [ fhir:context [ fhir:v "name" ] ; fhir:element [ fhir:v "given" ] ; fhir:listMode [ fhir:v "first" ] ; fhir:variable [ fhir:v "given" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:transform [ fhir:v "evaluate" ] ; fhir:parameter ( [ fhir:value [ a fhir:string ; fhir:v "given.replaceMatches('$', ' ')" ] ] ) ] ) ] [ fhir:name [ fhir:v "set other names" ] ; fhir:source ( [ fhir:context [ fhir:v "name" ] ; fhir:element [ fhir:v "given" ] ; fhir:listMode [ fhir:v "not_first" ] ; fhir:variable [ fhir:v "other" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:variable [ fhir:v "tName" ] ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "spaced" ] ; fhir:transform [ fhir:v "evaluate" ] ; fhir:parameter ( [ fhir:value [ a fhir:string ; fhir:v "other.replaceMatches('$', ' ')" ] ] ) ] [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:transform [ fhir:v "append" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "tName" ] ] [ fhir:value [ a fhir:id ; fhir:v "spaced" ] ] ) ] ) ] [ fhir:name [ fhir:v "add family name" ] ; fhir:source ( [ fhir:context [ fhir:v "name" ] ; fhir:element [ fhir:v "family" ] ; fhir:variable [ fhir:v "family" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:variable [ fhir:v "tName" ] ] [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:transform [ fhir:v "append" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "tName" ] ] [ fhir:value [ a fhir:id ; fhir:v "family" ] ] ) ] ) ] [ fhir:name [ fhir:v "set full name" ] ; fhir:source ( [ fhir:context [ fhir:v "name" ] ; fhir:element [ fhir:v "text" ] ; fhir:variable [ fhir:v "text" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "ddcc" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "name" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "text" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "LabToDDCC" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:input ( [ fhir:name [ fhir:v "lab" ] ; fhir:type [ fhir:v "SHCLabDM" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "test" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "code" ] ; fhir:source ( [ fhir:context [ fhir:v "lab" ] ; fhir:element [ fhir:v "code" ] ; fhir:variable [ fhir:v "code" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "coding" ] ; fhir:source ( [ fhir:context [ fhir:v "code" ] ; fhir:element [ fhir:v "coding" ] ; fhir:listMode [ fhir:v "first" ] ; fhir:variable [ fhir:v "labType" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set default type" ] ; fhir:source ( [ fhir:context [ fhir:v "labType" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "type" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "labType" ] ] ) ] ) ] [ fhir:name [ fhir:v "translate loinc type" ] ; fhir:source ( [ fhir:context [ fhir:v "labType" ] ; fhir:condition [ fhir:v "labType.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-covid19-loinc')" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "type" ] ; fhir:transform [ fhir:v "translate" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "labType" ] ] [ fhir:value [ a fhir:string ; fhir:v "http://smart.who.int/ddcc/ConceptMap/lab-test-type-covid19-loinc-to-icd11" ] ] [ fhir:value [ a fhir:string ; fhir:v "Coding" ] ] ) ] ) ] [ fhir:name [ fhir:v "set pathogen to COVID" ] ; fhir:source ( [ fhir:context [ fhir:v "labType" ] ; fhir:condition [ fhir:v "labType.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-covid19-loinc')" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "pathogen" ] ; fhir:transform [ fhir:v "c" ] ; fhir:parameter ( [ fhir:value [ a fhir:string ; fhir:v "http://id.who.int/icd11/mms" ] ] [ fhir:value [ a fhir:string ; fhir:v "XN109" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "set date" ] ; fhir:source ( [ fhir:context [ fhir:v "lab" ] ; fhir:element [ fhir:v "effectiveDateTime" ] ; fhir:variable [ fhir:v "date" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "date" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "date" ] ] ) ] ) ] [ fhir:name [ fhir:v "valueCodeableConcept" ] ; fhir:source ( [ fhir:context [ fhir:v "lab" ] ; fhir:element [ fhir:v "valueCodeableConcept" ] ; fhir:variable [ fhir:v "value" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "coding" ] ; fhir:source ( [ fhir:context [ fhir:v "value" ] ; fhir:element [ fhir:v "coding" ] ; fhir:listMode [ fhir:v "first" ] ; fhir:variable [ fhir:v "result" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "set default result" ] ; fhir:source ( [ fhir:context [ fhir:v "result" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "result" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "result" ] ] ) ] ) ] [ fhir:name [ fhir:v "translate snomed result" ] ; fhir:source ( [ fhir:context [ fhir:v "result" ] ; fhir:condition [ fhir:v "result.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-snomed')" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "test" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "result" ] ; fhir:transform [ fhir:v "translate" ] ; fhir:parameter ( [ fhir:value [ a fhir:id ; fhir:v "result" ] ] [ fhir:value [ a fhir:string ; fhir:v "http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-snomed-to-icd11" ] ] ) ] ) ] ) ] ) ] ) ] ) . # # -------------------------------------------------------------------------------------